ENSGALG00000005647


Gallus gallus

Features
Gene ID: ENSGALG00000005647
  
Biological name :ABCD3
  
Synonyms : ABCD3 / ATP binding cassette subfamily D member 3
  
Possible biological names infered from orthology : ATP-binding cassette, sub-family D (ALD), member 3 / P28288 / P55096
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 13570708
Gene end: 13597078
  
Corresponding Affymetrix probe sets: Gga.18455.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009045
NCBI entrez gene - 424487     See in Manteia.
RefSeq - NM_001012597
RefSeq Peptide - NP_001012615
swissprot - Q5F4B9
Ensembl - ENSGALG00000005647
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcd3aENSDARG00000104085Danio rerio
 abcd3bENSDARG00000002947Danio rerio
 ABCD3ENSG00000117528Homo sapiens
 Abcd3ENSMUSG00000028127Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCD2 / ATP binding cassette subfamily D member 2 / Q9UBJ2* / ATP-binding cassette, sub-family D (ALD), member 2*ENSGALG0000004255438
ABCD4 / ATP binding cassette subfamily D member 4 / O14678* / O89016* / ATP-binding cassette, sub-family D (ALD), member 4*ENSGALG0000001022925


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR005283  Peroxysomal long chain fatty acyl transporter
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031241  ATP-binding cassette sub-family D member 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0006635 fatty acid beta-oxidation IEA
 biological_processGO:0007031 peroxisome organization IEA
 biological_processGO:0015910 peroxisomal long-chain fatty acid import IEA
 biological_processGO:0042760 very long-chain fatty acid catabolic process IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005778 peroxisomal membrane IEA
 cellular_componentGO:0005782 peroxisomal matrix IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005324 long-chain fatty acid transporter activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000013777 PEX3 / peroxisomal biogenesis factor 3 / P56589* / Q9QXY9* / Peroxisomal biosis factor 3 *  / reaction
 ENSGALG00000042554 ABCD2 / ATP binding cassette subfamily D member 2 / Q9UBJ2* / ATP-binding cassette, sub-family D (ALD), member 2*  / complex






 

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