ENSGALG00000042554


Gallus gallus

Features
Gene ID: ENSGALG00000042554
  
Biological name :ABCD2
  
Synonyms : ABCD2 / ATP binding cassette subfamily D member 2
  
Possible biological names infered from orthology : ATP-binding cassette, sub-family D (ALD), member 2 / Q9UBJ2
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 15281148
Gene end: 15323045
  
Corresponding Affymetrix probe sets: Gga.18712.1.S1_at (Chicken Array)   Gga.19118.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052341
NCBI entrez gene - 417694     See in Manteia.
RefSeq - NM_001199395
RefSeq Peptide - NP_001186324
swissprot - A0A1D5PHR1
Ensembl - ENSGALG00000042554
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcd2ENSDARG00000059409Danio rerio
 ABCD2ENSG00000173208Homo sapiens
 Abcd2ENSMUSG00000055782Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCD3 / ATP binding cassette subfamily D member 3 / P28288* / P55096* / ATP-binding cassette, sub-family D (ALD), member 3*ENSGALG0000000564735
ABCD4 / ATP binding cassette subfamily D member 4 / O14678* / O89016* / ATP-binding cassette, sub-family D (ALD), member 4*ENSGALG0000001022922


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031239  ATP-binding cassette sub-family D member 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000038 very long-chain fatty acid metabolic process IEA
 biological_processGO:0006635 fatty acid beta-oxidation IEA
 biological_processGO:0032000 positive regulation of fatty acid beta-oxidation IEA
 biological_processGO:0042760 very long-chain fatty acid catabolic process IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000005647 ABCD3 / ATP binding cassette subfamily D member 3 / P28288* / P55096* / ATP-binding cassette, sub-family D (ALD), member 3*  / complex
 ENSGALG00000013777 PEX3 / peroxisomal biogenesis factor 3 / P56589* / Q9QXY9* / Peroxisomal biosis factor 3 *  / reaction






 

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