ENSGALG00000005811


Gallus gallus

Features
Gene ID: ENSGALG00000005811
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : COL7A1 / Collagen alpha-1(VII) chain / collagen type VII alpha 1 chain / Q02388 / Q63870
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 9077383
Gene end: 9082535
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000009317
swissprot - F1NBA6
Ensembl - ENSGALG00000005811
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 col7a1ENSDARG00000021720Danio rerio
 COL7A1ENSG00000114270Homo sapiens
 Col7a1ENSMUSG00000025650Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL14A1 / collagen alpha-1(XIV) chain precursor / Q80X19* / Q05707* / Collagen alpha-1(XIV) chain * / collagen type XIV alpha 1 chain*ENSGALG0000003767524
COL12A1 / collagen type XII alpha 1 chain / Q60847* / Q99715* / Collagen alpha-1(XII) chain *ENSGALG0000001590823
COL20A1 / collagen type XX alpha 1 chain / Q923P0* / Q9P218* / Collagen alpha-1(XX) chain *ENSGALG0000000579717
COL6A3 / collagen type VI alpha 3 chain / P12111* / collagen, type VI, alpha 3*ENSGALG0000000392311
VWA2 / von Willebrand factor A domain containing 2 / Q5GFL6* / Q70UZ7*ENSGALG0000000898010
VIT / vitrin precursor / Q6UXI7* / Q8VHI5* / vitrin*ENSGALG000000105834
COCH / O42163 / Cochlin / O43405* / Q62507*ENSGALG000000099203
ENSGALG000000358540


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Collagen degradation
Extracellular matrix organization
Collagen biosynthesis and modifying enzymes
COPII-mediated vesicle transport
Integrin cell surface interactions
Anchoring fibril formation
Cargo concentration in the ER
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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