ENSGALG00000006480


Gallus gallus

Features
Gene ID: ENSGALG00000006480
  
Biological name :TCF7
  
Synonyms : TCF7 / transcription factor 7
  
Possible biological names infered from orthology : P36402 / Q00417 / transcription factor 7, T cell specific
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 16006866
Gene end: 16064664
  
Corresponding Affymetrix probe sets: Gga.139.1.S1_at (Chicken Array)   Gga.6066.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010462
NCBI entrez gene - 395229     See in Manteia.
RefSeq - XM_015294007
RefSeq - NM_204547
RefSeq - XM_015294005
RefSeq - XM_015294006
RefSeq - XM_015293995
RefSeq - XM_015293996
RefSeq - XM_015293997
RefSeq - XM_015293998
RefSeq - XM_015293999
RefSeq - XM_015294000
RefSeq - XM_015294001
RefSeq - XM_015294003
RefSeq - XM_015294004
RefSeq Peptide - NP_989878
swissprot - Q8JHX2
Ensembl - ENSGALG00000006480
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tcf7ENSDARG00000038672Danio rerio
 TCF7ENSG00000081059Homo sapiens
 Tcf7ENSMUSG00000000782Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TCF7L2 / transcription factor 7 like 2 / Q924A0* / Q9NQB0* / transcription factor 7 like 2, T cell specific, HMG box*ENSGALG0000000888362
LEF1 / lymphoid enhancer binding factor 1 / P27782* / Q9UJU2*ENSGALG0000003196057


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR013558  CTNNB1 binding, N-teminal
 IPR024940  Transcription factor TCF/LEF
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0033153 T cell receptor V(D)J recombination IEA
 biological_processGO:0060070 canonical Wnt signaling pathway IBA
 biological_processGO:0071353 cellular response to interleukin-4 IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005667 transcription factor complex IBA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008013 beta-catenin binding IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
Formation of the beta-catenin:TCF transactivating complex
Deactivation of the beta-catenin transactivating complex
Repression of WNT target genes
RUNX3 regulates WNT signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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