ENSGALG00000006837


Gallus gallus

Features
Gene ID: ENSGALG00000006837
  
Biological name :TSPAN4
  
Synonyms : tetraspanin 4 / TSPAN4
  
Possible biological names infered from orthology : O14817 / Q9DCK3
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 15271751
Gene end: 15336034
  
Corresponding Affymetrix probe sets: Gga.5755.1.S1_at (Chicken Array)   Gga.5755.2.S1_a_at (Chicken Array)   Gga.5755.3.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011048
Ensembl peptide - ENSGALP00000054049
Ensembl peptide - ENSGALP00000049284
NCBI entrez gene - 423104     See in Manteia.
RefSeq - XM_421038
RefSeq - XM_015286701
RefSeq - XM_015286702
RefSeq - XM_015286703
RefSeq - XM_015286696
RefSeq - XM_015286697
RefSeq - XM_015286698
RefSeq - XM_015286699
RefSeq - XM_015286700
swissprot - E1BVM3
swissprot - A0A1D5PMH1
swissprot - A0A1D5P983
Ensembl - ENSGALG00000006837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspan4aENSDARG00000089354Danio rerio
 O14817ENSG00000214063Homo sapiens
 Q9DCK3ENSMUSG00000025511Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TSPAN9 / tetraspanin 9 / O75954* / Q8BJU2* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSGALG0000001434656
TSPAN8 / tetraspanin 8 / P19075* / Q8R3G9*ENSGALG0000001015230
TSPAN1 / tetraspanin-1 / O60635* / Q99J59*ENSGALG0000001034328
TSPAN18 / tetraspanin-18 / Q80WR1* / Q96SJ8*ENSGALG0000003690125
CD82 / CD82 molecule / P27701* / P40237* / CD82 antigen *ENSGALG0000003821725
ENSGALG0000004286624
CD81 / CD81 antigen / P35762* / P60033* / CD81 molecule*ENSGALG0000000654623
TSPAN2 / tetraspanin 2 / O60636* / Q922J6*ENSGALG0000000255422
CD9 / CD9 molecule / P21926* / P40240* / CD9 antigen *ENSGALG0000001727421
TSPAN19 / tetraspanin 19 / P0C672*ENSGALG0000002710320


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0065003 protein-containing complex assembly IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031982 vesicle IEA
 molecular_functionGO:0003823 antigen binding IEA
 molecular_functionGO:0005178 integrin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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