ENSDARG00000089354


Danio rerio

Features
Gene ID: ENSDARG00000089354
  
Biological name :tspan4a
  
Synonyms : tetraspanin 4a / tspan4a
  
Possible biological names infered from orthology : O14817 / Q9DCK3 / tetraspanin 4 / TSPAN4
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 50801307
Gene end: 50823466
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000143203
NCBI entrez gene - 436620     See in Manteia.
RefSeq - NM_001002348
RefSeq Peptide - NP_001002348
swissprot - A0A1L1QZT1
swissprot - Q6DHQ4
ZFIN ID - ZDB-GENE-040718-38
Ensembl - ENSDARG00000089354
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSPAN4ENSGALG00000006837Gallus gallus
 O14817ENSG00000214063Homo sapiens
 Q9DCK3ENSMUSG00000025511Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tspan9a / tetraspanin 9a / O75954* / Q8BJU2* / TSPAN9* / tetraspanin 9* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSDARG0000002529953
Q6GMK6 / tspan9b / tetraspanin 9b / O75954* / Q8BJU2* / TSPAN9* / tetraspanin 9* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSDARG0000004570651
tspan4b / tetraspanin 4bENSDARG0000007039143
zgc:64051 / CD53* / P19397* / Q61451* / CD53 molecule* / Leukocyte surface antigen CD53 *ENSDARG0000006823332
tspan35 / tetraspanin 35ENSDARG0000002575731
cd82a / CD82 molecule a / CD82* / P27701* / P40237* / CD82 molecule* / CD82 antigen *ENSDARG0000001909829
cd82b / CD82 molecule b / CD82* / P27701* / P40237* / CD82 molecule* / CD82 antigen *ENSDARG0000002607029
cd81a / CD81 molecule a / CD81* / P35762* / P60033* / CD81 molecule* / CD81 antigen *ENSDARG0000003608029
tspan18b / tetraspanin 18b / Q80WR1* / Q96SJ8* / TSPAN18* / tetraspanin 18*ENSDARG0000001501528
cd9b / CD9 molecule b / CD9* / P21926* / P40240* / CD9 molecule* / CD9 antigen *ENSDARG0000001669127
cd9a / CD9 molecule a / CD9* / P21926* / P40240* / CD9 molecule* / CD9 antigen *ENSDARG0000000584226
tspan18a / tetraspanin 18a / Q80WR1* / Q96SJ8* / TSPAN18* / tetraspanin 18*ENSDARG0000005665626
tspan34 / tetraspanin 34ENSDARG0000010395126
tspan1 / tetraspanin 1 / O60635* / Q99J59*ENSDARG0000005202725
tspan2b / tetraspanin 2b / O60636* / Q922J6* / TSPAN2* / tetraspanin 2*ENSDARG0000005920225
zgc:171713ENSDARG0000007551525
tspan2a / tetraspanin 2a / O60636* / Q922J6* / TSPAN2* / tetraspanin 2*ENSDARG0000000375424
cd81b / CD81 molecule b / CD81* / P60033* / CD81 molecule*ENSDARG0000002243723
si:ch73-139j3.4 / P0C672* / TSPAN19* / tetraspanin 19*ENSDARG0000008804422


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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