ENSDARG00000016691


Danio rerio

Features
Gene ID: ENSDARG00000016691
  
Biological name :cd9b
  
Synonyms : cd9b / CD9 molecule b
  
Possible biological names infered from orthology : CD9 / CD9 antigen / CD9 molecule / P21926 / P40240
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 4234994
Gene end: 4261673
  
Corresponding Affymetrix probe sets: Dr.4409.1.S1_at (Zebrafish Array)   NM_213428_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000094096
Ensembl peptide - ENSDARP00000026201
Ensembl peptide - ENSDARP00000094093
Ensembl peptide - ENSDARP00000125557
Ensembl peptide - ENSDARP00000115141
Ensembl peptide - ENSDARP00000125367
NCBI entrez gene - 406737     See in Manteia.
RefSeq - NM_213428
RefSeq Peptide - NP_998593
swissprot - H0WFC5
swissprot - Q1L9G6
swissprot - Q1L9G8
swissprot - Q1L9G9
swissprot - Q1L9H0
ZFIN ID - ZDB-GENE-040426-2768
Ensembl - ENSDARG00000016691
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CD9ENSGALG00000017274Gallus gallus
 CD9ENSG00000010278Homo sapiens
 Cd9ENSMUSG00000030342Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cd9a / CD9 molecule a / CD9* / P21926* / P40240* / CD9 molecule* / CD9 antigen *ENSDARG0000000584262
cd81a / CD81 molecule a / CD81* / P35762* / P60033* / CD81 molecule* / CD81 antigen *ENSDARG0000003608045
tspan2a / tetraspanin 2a / O60636* / Q922J6* / TSPAN2* / tetraspanin 2*ENSDARG0000000375444
tspan2b / tetraspanin 2b / O60636* / Q922J6* / TSPAN2* / tetraspanin 2*ENSDARG0000005920242
cd81b / CD81 molecule b / CD81* / P60033* / CD81 molecule*ENSDARG0000002243741
tspan9a / tetraspanin 9a / O75954* / Q8BJU2* / TSPAN9* / tetraspanin 9* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSDARG0000002529932
Q6GMK6 / tspan9b / tetraspanin 9b / O75954* / Q8BJU2* / TSPAN9* / tetraspanin 9* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSDARG0000004570631
tspan18b / tetraspanin 18b / Q80WR1* / Q96SJ8* / TSPAN18* / tetraspanin 18*ENSDARG0000001501530
tspan35 / tetraspanin 35ENSDARG0000002575729
cd82b / CD82 molecule b / CD82* / P27701* / P40237* / CD82 molecule* / CD82 antigen *ENSDARG0000002607029
tspan18a / tetraspanin 18a / Q80WR1* / Q96SJ8* / TSPAN18* / tetraspanin 18*ENSDARG0000005665629
tspan4a / tetraspanin 4a / O14817* / TSPAN4* / tetraspanin 4*ENSDARG0000008935428
cd82a / CD82 molecule a / CD82* / P27701* / P40237* / CD82 molecule* / CD82 antigen *ENSDARG0000001909827
tspan34 / tetraspanin 34ENSDARG0000010395127
tspan4b / tetraspanin 4bENSDARG0000007039126
zgc:64051 / CD53* / P19397* / Q61451* / CD53 molecule* / Leukocyte surface antigen CD53 *ENSDARG0000006823325
zgc:171713ENSDARG0000007551525
tspan1 / tetraspanin 1 / O60635* / Q99J59*ENSDARG0000005202724
si:ch73-139j3.4 / P0C672* / TSPAN19* / tetraspanin 19*ENSDARG0000008804419


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0048916 posterior lateral line development IMP
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Sperm:Oocyte Membrane Binding


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000940 posterior lateral line neuromast posterior lateral line neuromast decreased amount , abnormal
Show

 ZFA:0001157 posterior lateral line primordium posterior lateral line primordium shape , abnormal
posterior lateral line primordium organization quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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