ENSDARG00000068233


Danio rerio

Features
Gene ID: ENSDARG00000068233
  
Biological name :zgc:64051
  
Synonyms : zgc:64051
  
Possible biological names infered from orthology : CD53 / CD53 molecule / Leukocyte surface antigen CD53 / P19397 / Q61451
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 26869580
Gene end: 26879321
  
Corresponding Affymetrix probe sets: Dr.25718.1.S1_at (Zebrafish Array)   NM_200371_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000089342
Ensembl peptide - ENSDARP00000119139
NCBI entrez gene - 393342     See in Manteia.
RefSeq - NM_200371
RefSeq Peptide - NP_956665
swissprot - F2Z4W8
swissprot - Q7T376
ZFIN ID - ZDB-GENE-040426-1349
Ensembl - ENSDARG00000068233
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CD53ENSG00000143119Homo sapiens
 Cd53ENSMUSG00000040747Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tspan9a / tetraspanin 9a / O75954* / Q8BJU2* / TSPAN9* / tetraspanin 9* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSDARG0000002529939
Q6GMK6 / tspan9b / tetraspanin 9b / O75954* / Q8BJU2* / TSPAN9* / tetraspanin 9* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSDARG0000004570636
tspan4b / tetraspanin 4bENSDARG0000007039135
tspan4a / tetraspanin 4a / O14817* / TSPAN4* / tetraspanin 4*ENSDARG0000008935435
cd82a / CD82 molecule a / CD82* / P27701* / P40237* / CD82 molecule* / CD82 antigen *ENSDARG0000001909830
tspan18b / tetraspanin 18b / Q80WR1* / Q96SJ8* / TSPAN18* / tetraspanin 18*ENSDARG0000001501529
tspan35 / tetraspanin 35ENSDARG0000002575729
cd82b / CD82 molecule b / CD82* / P27701* / P40237* / CD82 molecule* / CD82 antigen *ENSDARG0000002607029
tspan18a / tetraspanin 18a / Q80WR1* / Q96SJ8* / TSPAN18* / tetraspanin 18*ENSDARG0000005665629
cd81a / CD81 molecule a / CD81* / P35762* / P60033* / CD81 molecule* / CD81 antigen *ENSDARG0000003608028
tspan1 / tetraspanin 1 / O60635* / Q99J59*ENSDARG0000005202728
cd9b / CD9 molecule b / CD9* / P21926* / P40240* / CD9 molecule* / CD9 antigen *ENSDARG0000001669126
cd81b / CD81 molecule b / CD81* / P60033* / CD81 molecule*ENSDARG0000002243726
tspan34 / tetraspanin 34ENSDARG0000010395126
tspan2a / tetraspanin 2a / O60636* / Q922J6* / TSPAN2* / tetraspanin 2*ENSDARG0000000375425
cd9a / CD9 molecule a / CD9* / P21926* / P40240* / CD9 molecule* / CD9 antigen *ENSDARG0000000584225
zgc:171713ENSDARG0000007551525
tspan2b / tetraspanin 2b / O60636* / Q922J6* / TSPAN2* / tetraspanin 2*ENSDARG0000005920224
si:ch73-139j3.4 / P0C672* / TSPAN19* / tetraspanin 19*ENSDARG0000008804424


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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