ENSMUSG00000040747


Mus musculus

Features
Gene ID: ENSMUSG00000040747
  
Biological name :Cd53
  
Synonyms : Cd53 / Leukocyte surface antigen CD53 / Q61451
  
Possible biological names infered from orthology : CD53 molecule / P19397
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F2.3
Gene start: 106759921
Gene end: 106790149
  
Corresponding Affymetrix probe sets: 10501063 (MoGene1.0st)   1448617_at (Mouse Genome 430 2.0 Array)   1459744_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000035781
NCBI entrez gene - 12508     See in Manteia.
MGI - MGI:88341
RefSeq - NM_007651
RefSeq Peptide - NP_031677
swissprot - Q3U0W1
swissprot - Q61451
Ensembl - ENSMUSG00000040747
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:64051ENSDARG00000068233Danio rerio
 CD53ENSG00000143119Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BJU2 / Tspan9 / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA. / O75954* / tetraspanin 9*ENSMUSG0000003035242
Q9DCK3 / Tspan4 / tetraspanin 4 / O14817*ENSMUSG0000002551139
Q8R3G9 / Tspan8 / Tetraspanin-8 / P19075*ENSMUSG0000003412733
Cd82 / P40237 / CD82 antigen / P27701* / CD82 molecule*ENSMUSG0000002721531
Q80WR1 / Tspan18 / Tetraspanin-18 / Q96SJ8*ENSMUSG0000002721730
Q99J59 / Tspan1 / Tetraspanin-1 / O60635*ENSMUSG0000002869929
Cd81 / P35762 / CD81 antigen / P60033* / CD81 molecule*ENSMUSG0000003770629
Cd37 / Q61470 / Leukocyte antigen CD37 / P11049* / CD37 molecule*ENSMUSG0000003079828
Q922J6 / Tspan2 / tetraspanin 2 / O60636*ENSMUSG0000002785827
Cd9 / P40240 / CD9 antigen / P21926* / CD9 molecule*ENSMUSG0000003034226


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:1901741 positive regulation of myoblast fusion IDA
 cellular_componentGO:0001772 immunological synapse IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0005911 cell-cell junction IDA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002459 abnormal B cell physiology "abnormal function of B lymphocytes" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Adora2btm1Msit/Adora2btm1Msit,Tg(Sftpc-cre)1Blh/0
Genetic Background: involves: C57BL/6 * DBA/2

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr