ENSMUSG00000028699


Mus musculus

Features
Gene ID: ENSMUSG00000028699
  
Biological name :Tspan1
  
Synonyms : Q99J59 / Tetraspanin-1 / Tspan1
  
Possible biological names infered from orthology : O60635
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D1
Gene start: 116161869
Gene end: 116167601
  
Corresponding Affymetrix probe sets: 10515282 (MoGene1.0st)   1417957_a_at (Mouse Genome 430 2.0 Array)   1417958_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121906
Ensembl peptide - ENSMUSP00000030465
NCBI entrez gene - 66805     See in Manteia.
MGI - MGI:1914055
RefSeq - NM_133681
RefSeq - XM_006503290
RefSeq Peptide - NP_598442
swissprot - A0A0A0MQL3
swissprot - Q99J59
Ensembl - ENSMUSG00000028699
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspan1ENSDARG00000052027Danio rerio
 TSPAN1ENSGALG00000010343Gallus gallus
 O60635ENSG00000117472Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q80WR1 / Tspan18 / Tetraspanin-18 / Q96SJ8*ENSMUSG0000002721734
Q8BJU2 / Tspan9 / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA. / O75954* / tetraspanin 9*ENSMUSG0000003035229
Cd82 / P40237 / CD82 antigen / P27701* / CD82 molecule*ENSMUSG0000002721528
Q9DCK3 / Tspan4 / tetraspanin 4 / O14817*ENSMUSG0000002551127
Q8R3G9 / Tspan8 / Tetraspanin-8 / P19075*ENSMUSG0000003412727
Cd53 / Q61451 / Leukocyte surface antigen CD53 / P19397* / CD53 molecule*ENSMUSG0000004074727
Q922J6 / Tspan2 / tetraspanin 2 / O60636*ENSMUSG0000002785825
Cd37 / Q61470 / Leukocyte antigen CD37 / P11049* / CD37 molecule*ENSMUSG0000003079825
Cd81 / P35762 / CD81 antigen / P60033* / CD81 molecule*ENSMUSG0000003770625
Cd9 / P40240 / CD9 antigen / P21926* / CD9 molecule*ENSMUSG0000003034224


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0045807 positive regulation of endocytosis IEA
 biological_processGO:0050821 protein stabilization IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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