ENSGALG00000007260


Gallus gallus

Features
Gene ID: ENSGALG00000007260
  
Biological name :ZEB1
  
Synonyms : ZEB1 / zinc finger E-box-binding homeobox 1
  
Possible biological names infered from orthology : P37275 / Q64318
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 14376492
Gene end: 14497501
  
Corresponding Affymetrix probe sets: Gga.18053.1.A1_at (Chicken Array)   Gga.18053.1.S1_at (Chicken Array)   Gga.3548.1.S1_at (Chicken Array)   GgaAffx.20792.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011738
Ensembl peptide - ENSGALP00000057778
Ensembl peptide - ENSGALP00000044177
NCBI entrez gene - 396029     See in Manteia.
RefSeq - NM_205131
RefSeq - XM_015281304
RefSeq - XM_015281305
RefSeq Peptide - NP_990462
swissprot - A0A1D5PXT1
swissprot - A0A1D5NV04
swissprot - F1NB51
Ensembl - ENSGALG00000007260
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zeb1aENSDARG00000016788Danio rerio
 zeb1bENSDARG00000013207Danio rerio
 ZEB1ENSG00000148516Homo sapiens
 Zeb1ENSMUSG00000024238Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZEB2 / Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. / O60315* / Q9R0G7* / zinc finger E-box binding homeobox 2*ENSGALG0000004046547


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR008598  Drought induced 19 protein type, zinc-binding domain
 IPR009057  Homeobox-like domain superfamily
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0010464 regulation of mesenchymal cell proliferation IEA
 biological_processGO:0017015 regulation of transforming growth factor beta receptor signaling pathway IEA
 biological_processGO:0030857 negative regulation of epithelial cell differentiation IEA
 biological_processGO:0033081 regulation of T cell differentiation in thymus IEA
 biological_processGO:0045602 negative regulation of endothelial cell differentiation IEA
 biological_processGO:0045666 positive regulation of neuron differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048513 animal organ development IEA
 biological_processGO:0048596 embryonic camera-type eye morphogenesis IEA
 biological_processGO:0048598 embryonic morphogenesis IEA
 biological_processGO:0048704 embryonic skeletal system morphogenesis IEA
 biological_processGO:0048752 semicircular canal morphogenesis IEA
 biological_processGO:0051150 regulation of smooth muscle cell differentiation IEA
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0071230 cellular response to amino acid stimulus IEA
 biological_processGO:0090103 cochlea morphogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0070888 E-box binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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