ENSGALG00000007778


Gallus gallus
rrnaPES1lsu-rrnasmaturationtricistronictranscriptssu-rrnanucleoluscellbiogenesislargesubunitcomplexbindingbrctdomainpescadilloprocessingorganizationproliferationproteinlocalizationorganelleribosomeribosomalregulationcyclecondensedchromosomenucleus

Features
Gene ID: ENSGALG00000007778
  
Biological name :PES1
  
Synonyms : PES1 / pescadillo ribosomal biogenesis factor 1
  
Possible biological names infered from orthology : O00541 / Pescadillo homolog / Q9EQ61
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 10843134
Gene end: 10847630
  
Corresponding Affymetrix probe sets: Gga.6276.1.S1_at (Chicken Array)   Gga.6276.2.S1_a_at (Chicken Array)   Gga.6276.3.S1_at (Chicken Array)   Gga.6276.3.S1_s_at (Chicken Array)   GgaAffx.22359.1.S1_at (Chicken Array)   GgaAffx.22359.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012605
NCBI entrez gene - 770808     See in Manteia.
RefSeq - XM_015294929
swissprot - F1NP58
Ensembl - ENSGALG00000007778
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pesENSDARG00000018902Danio rerio
 PES1ENSG00000100029Homo sapiens
 Pes1ENSMUSG00000020430Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001357  BRCT domain
 IPR010613  Pescadillo


Gene Ontology (GO)
nitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular component biogenesiscellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationmacromolecule localizationcellular localizationcell cyclenitrogen compounitrogen compound metabolic processcellular componcellular component biogenesiscellular metabocellular metabolic processprimary metabolprimary metabolic processorganic substanorganic substance metabolic processcellular componcellular component organizationmacromolecule lmacromolecule localizationcellular localicellular localizationcell cyclecell cycle
organic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingprotein-containing complex bindingprotein-containing complex binding
cellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0007000 nucleolus organization IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0033365 protein localization to organelle IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IEA
 biological_processGO:0051726 regulation of cell cycle IEA
 cellular_componentGO:0000793 condensed chromosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030687 preribosome, large subunit precursor IEA
 cellular_componentGO:0070545 PeBoW complex IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0043021 ribonucleoprotein complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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