ENSGALG00000007832


Gallus gallus

Features
Gene ID: ENSGALG00000007832
  
Biological name :PEX13
  
Synonyms : peroxisomal biogenesis factor 13 / PEX13
  
Possible biological names infered from orthology : Peroxisomal membrane protein PEX13 / Q92968 / Q9D0K1
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 2106240
Gene end: 2113410
  
Corresponding Affymetrix probe sets: Gga.9815.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012694
NCBI entrez gene - 421197     See in Manteia.
RefSeq - NM_001199421
RefSeq Peptide - NP_001186350
swissprot - E1C0C4
Ensembl - ENSGALG00000007832
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pex13ENSDARG00000071037Danio rerio
 PEX13ENSG00000162928Homo sapiens
 Pex13ENSMUSG00000020283Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR007223  Peroxin 13, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001561 fatty acid alpha-oxidation IEA
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0001967 suckling behavior IEA
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0016560 protein import into peroxisome matrix, docking IEA
 biological_processGO:0021795 cerebral cortex cell migration IEA
 biological_processGO:0060152 microtubule-based peroxisome localization IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005778 peroxisomal membrane IEA
 cellular_componentGO:0005779 integral component of peroxisomal membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA


Pathways (from Reactome)
Pathway description
E3 ubiquitin ligases ubiquitinate target proteins
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002151 PEX12 / peroxisomal biogenesis factor 12 / O00623* / Q8VC48* / Peroxisome assembly protein 12 *  / complex
 ENSGALG00000002836 PEX14 / peroxisomal biogenesis factor 14 / O75381* / Q9R0A0* / Peroxisomal membrane protein PEX14 *  / complex
 ENSGALG00000005860 ACAA1 / acetyl-CoA acyltransferase 1 / Q921H8* / Acaa1a* / Acaa1b* / P09110* / Q8VCH0* / acetyl-Coenzyme A acyltransferase 1B* / acetyl-Coenzyme A acyltransferase 1A*  / complex
 ENSGALG00000006505 ZFAND6 / zinc finger AN1-type containing 6 / Q6FIF0* / Q9DCH6* / zinc finger, AN1-type domain 6*  / complex / reaction
 ENSGALG00000021213 UBE2D1 / ubiquitin conjugating enzyme E2 D1 / P51668* / P61080*  / complex / reaction
 ENSGALG00000013874 PEX7 / peroxisomal biogenesis factor 7 / O00628* / P97865* / Peroxisomal targeting signal 2 receptor *  / complex
 ENSGALG00000009410 PEX1 / peroxisomal biogenesis factor 1 / O43933* / Q5BL07* / Peroxisome biosis factor 1 *  / complex / reaction
 ENSGALG00000009236 AGPS / alkylglycerone phosphate synthase / O00116*  / complex
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / complex / reaction
 ENSGALG00000038128 UBE2D2 / ubiquitin conjugating enzyme E2 D2 / P62838* / P62837* / Ube2d2a* / ubiquitin-conjugating enzyme E2D 2A*  / complex / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / complex / reaction
 ENSGALG00000035636 PHYH / phytanoyl-CoA 2-hydroxylase / O14832* / O35386* / phytanoyl-CoA hydroxylase*  / complex
 ENSGALG00000035752 PEX2 / peroxisomal biogenesis factor 2 / P28328*  / complex






 

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