ENSGALG00000008055


Gallus gallus

Features
Gene ID: ENSGALG00000008055
  
Biological name :SYT13
  
Synonyms : synaptotagmin 13 / SYT13
  
Possible biological names infered from orthology : Q7L8C5 / Q9EQT6
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 22316657
Gene end: 22334645
  
Corresponding Affymetrix probe sets: GgaAffx.5041.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013055
NCBI entrez gene - 423175     See in Manteia.
RefSeq - NM_001199643
RefSeq - XM_015286998
RefSeq Peptide - NP_001186572
swissprot - E1C299
Ensembl - ENSGALG00000008055
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syt13ENSDARG00000012306Danio rerio
 SYT13ENSG00000019505Homo sapiens
 Syt13ENSMUSG00000027220Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYT17 / synaptotagmin 17 / Q920M7* / Q9BSW7*ENSGALG0000003053426
SYT12 / synaptotagmin 12 / Q8IV01* / Q920N7* / synaptotagmin XII*ENSGALG0000000430623
SYT15* / Q8C6N3* / Q9BQS2* / FO681492.1* / synaptotagmin 15*ENSGALG0000000204621
SYT14 / synaptotagmin 14 / Q7TN84* / Q8NB59*ENSGALG0000000988417
SYT16 / synaptotagmin 16 / Q17RD7* / Q7TN83*ENSGALG0000001186114


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR028692  Synaptotagmin-13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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