ENSGALG00000004306


Gallus gallus

Features
Gene ID: ENSGALG00000004306
  
Biological name :SYT12
  
Synonyms : synaptotagmin 12 / SYT12
  
Possible biological names infered from orthology : Q8IV01 / Q920N7 / synaptotagmin XII
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 1444687
Gene end: 1451053
  
Corresponding Affymetrix probe sets: Gga.11960.1.S1_at (Chicken Array)   GgaAffx.2671.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006848
NCBI entrez gene - 422998     See in Manteia.
RefSeq - NM_001199512
RefSeq - XM_015286206
RefSeq Peptide - NP_001186441
swissprot - E1BY95
Ensembl - ENSGALG00000004306
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syt12ENSDARG00000101776Danio rerio
 SYT12ENSG00000173227Homo sapiens
 Syt12ENSMUSG00000049303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYT17 / synaptotagmin 17 / Q920M7* / Q9BSW7*ENSGALG0000003053426
SYT13 / synaptotagmin 13 / Q7L8C5* / Q9EQT6*ENSGALG0000000805524
SYT15* / Q8C6N3* / Q9BQS2* / FO681492.1* / synaptotagmin 15*ENSGALG0000000204621
SYT14 / synaptotagmin 14 / Q7TN84* / Q8NB59*ENSGALG0000000988419
SYT16 / synaptotagmin 16 / Q17RD7* / Q7TN83*ENSGALG0000001186118


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR030537  Synaptotagmin-12


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0046928 regulation of neurotransmitter secretion IEA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 biological_processGO:0060291 long-term synaptic potentiation IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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