ENSMUSG00000049303


Mus musculus

Features
Gene ID: ENSMUSG00000049303
  
Biological name :Syt12
  
Synonyms : Q920N7 / synaptotagmin XII / Syt12
  
Possible biological names infered from orthology : Q8IV01 / synaptotagmin 12
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: A
Gene start: 4445908
Gene end: 4477447
  
Corresponding Affymetrix probe sets: 10464761 (MoGene1.0st)   1422878_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000130418
Ensembl peptide - ENSMUSP00000055237
NCBI entrez gene - 171180     See in Manteia.
MGI - MGI:2159601
RefSeq - NM_134164
RefSeq Peptide - NP_598925
swissprot - E9Q6I4
swissprot - Q14AG7
swissprot - Q920N7
Ensembl - ENSMUSG00000049303
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syt12ENSDARG00000101776Danio rerio
 SYT12ENSGALG00000004306Gallus gallus
 SYT12ENSG00000173227Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Syt17 / Q920M7 / Synaptotagmin-17 / Q9BSW7*ENSMUSG0000005842026
Syt13 / Q9EQT6 / Synaptotagmin-13 / Q7L8C5*ENSMUSG0000002722024
Syt14 / Q7TN84 / Synaptotagmin-14 / Q8NB59*ENSMUSG0000001620021
Syt15 / Q8C6N3 / Synaptotagmin-15 / Q9BQS2* / FO681492.1*ENSMUSG0000004147921
Syt16 / Q7TN83 / Synaptotagmin-16 / Q17RD7*ENSMUSG0000004491219


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001565  Synaptotagmin
 IPR030537  Synaptotagmin-12
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0046928 regulation of neurotransmitter secretion IEA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 biological_processGO:0048792 spontaneous exocytosis of neurotransmitter IEA
 biological_processGO:0060291 long-term synaptic potentiation IEA
 cellular_componentGO:0005623 cell IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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