ENSDARG00000101776


Danio rerio

Features
Gene ID: ENSDARG00000101776
  
Biological name :syt12
  
Synonyms : synaptotagmin XII / syt12
  
Possible biological names infered from orthology : Q8IV01 / Q920N7 / synaptotagmin 12
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 7461624
Gene end: 7489371
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000141169
NCBI entrez gene - 566397     See in Manteia.
swissprot - B3DJ38
ZFIN ID - ZDB-GENE-081022-147
Ensembl - ENSDARG00000101776
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYT12ENSGALG00000004306Gallus gallus
 SYT12ENSG00000173227Homo sapiens
 Syt12ENSMUSG00000049303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syt17 / synaptotagmin XVII / Q9BSW7* / synaptotagmin 17*ENSDARG0000006074128
syt14a / synaptotagmin XIVa / SYT14* / Q7TN84* / Q8NB59* / synaptotagmin 14*ENSDARG0000001093421
syt13 / synaptotagmin XIII / Q7L8C5* / Q9EQT6* / synaptotagmin 13*ENSDARG0000001230621
syt14b / synaptotagmin XIVb / SYT14* / Q7TN84* / Q8NB59* / synaptotagmin 14*ENSDARG0000000189119
syt15 / synaptotagmin XV / Q9BQS2* / Q8C6N3* / FO681492.1* / synaptotagmin 15*ENSDARG0000007992619
BX571884.1ENSDARG0000010707718
syt16 / synaptotagmin XVI / Q17RD7* / Q7TN83* / synaptotagmin 16*ENSDARG0000003076112


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR030537  Synaptotagmin-12


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0046928 regulation of neurotransmitter secretion IEA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 biological_processGO:0060291 long-term synaptic potentiation IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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