ENSGALG00000008145


Gallus gallus

Features
Gene ID: ENSGALG00000008145
  
Biological name :TYW5
  
Synonyms : E1C7T6 / tRNA wybutosine-synthesizing protein 5 / TYW5
  
Possible biological names infered from orthology : A2RSX7 / A2RUC4 / tRNA-yW synthesizing protein 5
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 11057662
Gene end: 11063068
  
Corresponding Affymetrix probe sets: GgaAffx.22467.1.S1_at (Chicken Array)   GgaAffx.22476.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013215
NCBI entrez gene - 424065     See in Manteia.
RefSeq - NM_001305131
RefSeq - XM_004942597
RefSeq Peptide - NP_001292060
swissprot - R9PXM8
swissprot - E1C7T6
Ensembl - ENSGALG00000008145
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tyw5ENSDARG00000069672Danio rerio
 TYW5ENSG00000162971Homo sapiens
 Tyw5ENSMUSG00000048495Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HSPBAP1 / HSPB1 associated protein 1 / Q8BK58* / Q96EW2*ENSGALG0000001167721
HIF1AN / hypoxia inducible factor 1 alpha subunit inhibitor / Q8BLR9* / Q9NWT6* / Hypoxia-inducible factor 1-alpha inhibitor *ENSGALG0000000569819
KDM8 / lysine demethylase 8 / Q8N371* / Q9CXT6* / JmjC domain-containing protein 5 *ENSGALG0000000630119


Protein motifs (from Interpro)
Interpro ID Name
 IPR003347  JmjC domain
 IPR029612  tRNA wybutosine-synthesizing protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0031591 wybutosine biosynthetic process ISS
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ISS
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA
 molecular_functionGO:0102524 tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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