ENSGALG00000008500


Gallus gallus

Features
Gene ID: ENSGALG00000008500
  
Biological name :RBSN
  
Synonyms : rabenosyn, RAB effector / RBSN
  
Possible biological names infered from orthology : Q80Y56 / Q9H1K0 / Rabenosyn-5
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 19758820
Gene end: 19769893
  
Corresponding Affymetrix probe sets: GgaAffx.5354.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013832
NCBI entrez gene - 416128     See in Manteia.
RefSeq - XM_004944729
RefSeq - XM_004944730
RefSeq - XM_004944731
swissprot - E1BSJ3
Ensembl - ENSGALG00000008500
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbsnENSDARG00000078215Danio rerio
 RBSNENSG00000131381Homo sapiens
 RbsnENSMUSG00000014550Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000306  FYVE zinc finger
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related
 IPR021565  Rabenosyn, Rab binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000011 vacuole inheritance IBA
 biological_processGO:0006895 Golgi to endosome transport IBA
 biological_processGO:0006896 Golgi to vacuole transport IBA
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0034058 endosomal vesicle fusion IBA
 biological_processGO:0034498 early endosome to Golgi transport IEA
 biological_processGO:0090160 Golgi to lysosome transport IEA
 biological_processGO:1903358 regulation of Golgi organization IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010009 cytoplasmic side of endosome membrane IBA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000011272 RAB5A / RAB5A, member RAS oncogene family / P20339* / Q9CQD1* / Ras-related protein Rab-5A *  / complex / reaction






 

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