ENSGALG00000008686


Gallus gallus

Features
Gene ID: ENSGALG00000008686
  
Biological name :TRDMT1
  
Synonyms : TRDMT1 / tRNA aspartic acid methyltransferase 1
  
Possible biological names infered from orthology : O14717 / O55055 / tRNA (cytosine(38)-C(5))-methyltransferase
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 19844753
Gene end: 19873594
  
Corresponding Affymetrix probe sets: GgaAffx.5464.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051763
Ensembl peptide - ENSGALP00000063185
Ensembl peptide - ENSGALP00000055008
Ensembl peptide - ENSGALP00000014121
NCBI entrez gene - 420520     See in Manteia.
RefSeq - NM_001024831
RefSeq - XM_015281385
RefSeq Peptide - NP_001020002
swissprot - F1NJ02
swissprot - A0A1D5PQ47
swissprot - Q5F4C9
swissprot - A0A1D5PG43
Ensembl - ENSGALG00000008686
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trdmt1ENSDARG00000034518Danio rerio
 O14717ENSG00000107614Homo sapiens
 O55055ENSMUSG00000026723Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001525  C-5 cytosine methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR031303  DNA methylase, C-5 cytosine-specific, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008175 tRNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr