ENSGALG00000009257


Gallus gallus
wdPLRG1repeatcomplexdomainmrnasplicingnucleusnuclearcatalyticstepyvtnrepeat-like-containingsuperfamily-repeat-containingconservedsiteg-proteinbetawd-viaproteinlocalizationregulationgstransitionmitoticcellcycle

Features
Gene ID: ENSGALG00000009257
  
Biological name :PLRG1
  
Synonyms : pleiotropic regulator 1 / PLRG1
  
Possible biological names infered from orthology : O43660 / Q922V4
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 20456316
Gene end: 20468731
  
Corresponding Affymetrix probe sets: Gga.9982.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015051
Ensembl peptide - ENSGALP00000059885
NCBI entrez gene - 422401     See in Manteia.
RefSeq - XM_420368
swissprot - A0A1L1RM96
swissprot - E1BVN5
Ensembl - ENSGALG00000009257
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 plrg1ENSDARG00000037283Danio rerio
 PLRG1ENSG00000171566Homo sapiens
 Plrg1ENSMUSG00000027998Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STRN / striatin / O43815* / O55106*ENSGALG0000001058021
STRN3 / striatin 3 / Q13033* / Q9ERG2* / striatin, calmodulin binding protein 3*ENSGALG0000004046421


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular localizationcell cyclenitrogen compound menitrogen compound metabolic processcellular metabolic pcellular metabolic processprimary metabolic prprimary metabolic processorganic substance meorganic substance metabolic processmacromolecule localimacromolecule localizationcellular localizatiocellular localizationcell cyclecell cycle
protein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenmembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0034504 protein localization to nucleus IEA
 biological_processGO:1900087 positive regulation of G1/S transition of mitotic cell cycle IEA
 cellular_componentGO:0000974 Prp19 complex IBA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005662 DNA replication factor A complex IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex IBA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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