ENSGALG00000009652


Gallus gallus

Features
Gene ID: ENSGALG00000009652
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : O75445 / Q2QI47 / USH2A / usherin
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 20387409
Gene end: 20480206
  
Corresponding Affymetrix probe sets: GgaAffx.6054.1.S1_at (Chicken Array)   GgaAffx.6059.1.S1_at (Chicken Array)   GgaAffx.6060.1.S1_at (Chicken Array)   GgaAffx.6064.1.S1_at (Chicken Array)   GgaAffx.6066.1.S1_at (Chicken Array)   GgaAffx.6070.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015700
NCBI entrez gene - 421358     See in Manteia.
RefSeq - XM_015283895
swissprot - E1C9H7
Ensembl - ENSGALG00000009652
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ush2aENSDARG00000029482Danio rerio
 USH2AENSG00000042781Homo sapiens
 Ush2aENSMUSG00000026609Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NTN1 / netrin-1 precursor / O09118* / O95631* / netrin 1*ENSGALG000000236268
NTN3 / netrin-3 precursor / O00634* / Q3UUG6* / Q9R1A3* / Tbc1d24* / netrin 3*ENSGALG000000290728
NTNG2 / netrin G2 / Q8R4F1* / Q96CW9*ENSGALG000000036777
NTNG1 / netrin G1 / Q8R4G0* / Q9Y2I2*ENSGALG000000311227
MEGF9* / Q8BH27* / Q9H1U4* / multiple EGF like domains 9* / Multiple epidermal growth factor-like domains protein 9 *ENSGALG000000334553
USH2A* / O75445* / Q2QI47* / usherin*ENSGALG000000455632
USH2A* / O75445* / Q2QI47* / usherin*ENSGALG000000444190


Protein motifs (from Interpro)
Interpro ID Name
 IPR002049  Laminin EGF domain
 IPR003961  Fibronectin type III
 IPR006558  LamG-like jellyroll fold
 IPR008211  Laminin, N-terminal
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR026915  Usherin


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr