ENSGALG00000010459


Gallus gallus

Features
Gene ID: ENSGALG00000010459
  
Biological name :VIPAS39
  
Synonyms : VIPAS39 / VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
  
Possible biological names infered from orthology : Q8BGQ1 / Q9H9C1
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 39263309
Gene end: 39274895
  
Corresponding Affymetrix probe sets: Gga.7417.1.S1_at (Chicken Array)   Gga.7417.2.S1_a_at (Chicken Array)   Gga.7417.3.S1_at (Chicken Array)   GgaAffx.21004.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045207
Ensembl peptide - ENSGALP00000017009
NCBI entrez gene - 423377     See in Manteia.
RefSeq - XM_015287723
RefSeq - XM_015287721
swissprot - F1NNQ1
swissprot - A0A1D5NXV6
Ensembl - ENSGALG00000010459
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5TYV4ENSDARG00000103690Danio rerio
 Q9H9C1ENSG00000151445Homo sapiens
 Q8BGQ1ENSMUSG00000021038Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0008333 endosome to lysosome transport IEA
 biological_processGO:0017185 peptidyl-lysine hydroxylation IEA
 biological_processGO:0030199 collagen fibril organization IEA
 biological_processGO:0032963 collagen metabolic process IEA
 biological_processGO:0043687 post-translational protein modification IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0030897 HOPS complex IEA
 cellular_componentGO:0055037 recycling endosome IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr