ENSGALG00000010588


Gallus gallus

Features
Gene ID: ENSGALG00000010588
  
Biological name :GNOT2
  
Synonyms : Gallus gallus Gnot2 homeodomain protein (GNOT2), mRNA. / GNOT2
  
Possible biological names infered from orthology : A8MTQ0 / Homeobox protein notochord / NOTO / notochord homeobox / Q5TIS6
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 90306330
Gene end: 90308600
  
Corresponding Affymetrix probe sets: Gga.662.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017209
NCBI entrez gene - 396117     See in Manteia.
RefSeq - NM_205198
RefSeq - XM_015286073
RefSeq Peptide - NP_990529
swissprot - F1NJ95
Ensembl - ENSGALG00000010588
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 notoENSDARG00000021201Danio rerio
 NOTOENSG00000214513Homo sapiens
 NotoENSMUSG00000068302Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NOTO / A8MTQ0* / Q5TIS6* / notochord homeobox* / Homeobox protein notochord *ENSGALG0000003598139
VAX1 / ventral anterior homeobox 1 / Q2NKI2* / Q5SQQ9*ENSGALG0000000926128
EMX2 / empty spiracles homeobox 2 / Q04743* / Q04744* / Homeobox protein EMX2 *ENSGALG0000000930225
EMX1 / empty spiracles homeobox 1 / Q04741* / Q04742* / Homeobox protein EMX1 *ENSGALG0000003051625
EN1 / engrailed homeobox 1 / P09065* / Q05925* / Homeobox protein engrailed-1 *ENSGALG0000004238922
ENSGALG000000412953


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr