ENSGALG00000010924


Gallus gallus

Features
Gene ID: ENSGALG00000010924
  
Biological name :NFIA
  
Synonyms : NFIA / Nuclear factor 1 A-type / P17923
  
Possible biological names infered from orthology : nuclear factor I A / Q02780 / Q12857
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 27133821
Gene end: 27369637
  
Corresponding Affymetrix probe sets: Gga.13333.1.S1_at (Chicken Array)   Gga.710.1.S1_a_at (Chicken Array)   Gga.710.6.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000064438
Ensembl peptide - ENSGALP00000064548
Ensembl peptide - ENSGALP00000017752
Ensembl peptide - ENSGALP00000037223
Ensembl peptide - ENSGALP00000059339
Ensembl peptide - ENSGALP00000061058
Ensembl peptide - ENSGALP00000061062
NCBI entrez gene - 396210     See in Manteia.
RefSeq - NM_205273
RefSeq Peptide - NP_990604
swissprot - P17923
swissprot - Q90925
swissprot - Q90927
swissprot - Q90928
swissprot - A0A1L1RKS3
swissprot - Q90929
swissprot - F1NT77
Ensembl - ENSGALG00000010924
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFIAENSG00000162599Homo sapiens
 NfiaENSMUSG00000028565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NFIB / P17924 / Nuclear factor 1 B-type / P97863* / O00712* / nuclear factor I B*ENSGALG0000000544154
NFIC / P17926 / Nuclear factor 1 C-type / P70255* / P08651* / nuclear factor I C*ENSGALG0000004164345


Protein motifs (from Interpro)
Interpro ID Name
 IPR000647  CTF transcription factor/nuclear factor 1
 IPR003619  MAD homology 1, Dwarfin-type
 IPR019548  CTF transcription factor/nuclear factor 1, N-terminal
 IPR019739  CTF transcription factor/nuclear factor 1, conserved site
 IPR020604  CTF transcription factor/nuclear factor 1, DNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060074 synapse maturation IEA
 biological_processGO:0072189 ureter development IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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