ENSGALG00000010936


Gallus gallus

Features
Gene ID: ENSGALG00000010936
  
Biological name :MYF6
  
Synonyms : MYF6 / myogenic factor 6
  
Possible biological names infered from orthology : P15375 / P23409
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 39998073
Gene end: 39999566
  
Corresponding Affymetrix probe sets: Gga.608.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000030023
NCBI entrez gene - 417873     See in Manteia.
RefSeq - NM_001030746
RefSeq - XM_015281916
RefSeq Peptide - NP_001025917
swissprot - A0A1I7Q431
Ensembl - ENSGALG00000010936
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 myf6ENSDARG00000029830Danio rerio
 MYF6ENSG00000111046Homo sapiens
 Myf6ENSMUSG00000035923Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYOG / P17920 / Myogenin / P12979* / P15173*ENSGALG0000000017243
MYOD1 / myoblast determination protein 1 homolog / P10085* / P15172* / myogenic differentiation 1* / Myoblast determination protein 1 *ENSGALG0000000621640
MYF5 / myogenic factor 5 / P13349* / P24699*ENSGALG0000002809139


Protein motifs (from Interpro)
Interpro ID Name
 IPR002546  Myogenic basic muscle-specific protein
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0007519 skeletal muscle tissue development IEA
 biological_processGO:0035914 skeletal muscle cell differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0060415 muscle tissue morphogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001093 TCF3 / transcription factor 3 / P15806* / P15923* / Transcription factor E2-alpha *  / complex
 ENSGALG00000014645 MEF2C / myocyte enhancer factor 2C / Q06413* / Q8CFN5* / Mus musculus myocyte enhancer factor 2C (Mef2c), transcript variant 14, mRNA.*  / complex / reaction
 ENSGALG00000032366 MEF2A / myocyte enhancer factor 2A / Q02078* / Q60929* / Mus musculus myocyte enhancer factor 2A (Mef2a), transcript variant 7, mRNA.*  / complex / reaction






 

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