ENSGALG00000028091


Gallus gallus

Features
Gene ID: ENSGALG00000028091
  
Biological name :MYF5
  
Synonyms : MYF5 / myogenic factor 5
  
Possible biological names infered from orthology : P13349 / P24699
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 40002758
Gene end: 40003972
  
Corresponding Affymetrix probe sets: Gga.379.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043455
NCBI entrez gene - 395633     See in Manteia.
RefSeq - NM_001030363
RefSeq Peptide - NP_001025534
swissprot - R4GMI9
Ensembl - ENSGALG00000028091
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 myf5ENSDARG00000007277Danio rerio
 MYF5ENSG00000111049Homo sapiens
 Myf5ENSMUSG00000000435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYOD1 / myoblast determination protein 1 homolog / P10085* / P15172* / myogenic differentiation 1* / Myoblast determination protein 1 *ENSGALG0000000621651
MYF6 / myogenic factor 6 / P15375* / P23409*ENSGALG0000001093636
MYOG / P17920 / Myogenin / P12979* / P15173*ENSGALG0000000017231


Protein motifs (from Interpro)
Interpro ID Name
 IPR002546  Myogenic basic muscle-specific protein
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR022032  Myogenic determination factor 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001502 cartilage condensation IEA
 biological_processGO:0001503 ossification IEA
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0001952 regulation of cell-matrix adhesion IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0007519 skeletal muscle tissue development IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0035914 skeletal muscle cell differentiation IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048644 muscle organ morphogenesis IEA
 biological_processGO:0048704 embryonic skeletal system morphogenesis IEA
 biological_processGO:0060415 muscle tissue morphogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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