ENSGALG00000011098


Gallus gallus

Features
Gene ID: ENSGALG00000011098
  
Biological name :TAF5L
  
Synonyms : TAF5L / TATA-box binding protein associated factor 5 like
  
Possible biological names infered from orthology : Mus musculus TATA-box binding protein associated factor 5 like (Taf5l), transcript variant 2, mRNA. / O75529 / Q91WQ5
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 40214428
Gene end: 40230986
  
Corresponding Affymetrix probe sets: GgaAffx.7034.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018059
NCBI entrez gene - 421538     See in Manteia.
RefSeq - XM_015284388
swissprot - E1C8E9
Ensembl - ENSGALG00000011098
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf5lENSDARG00000025808Danio rerio
 TAF5LENSG00000135801Homo sapiens
 Taf5lENSMUSG00000038697Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAF5 / TATA-box binding protein associated factor 5 / Q15542*ENSGALG0000000824140
ATG16L1 / autophagy related 16 like 1 / Q676U5* / Q8C0J2* / autophagy related 16-like 1 (S. cerevisiae)*ENSGALG0000000161917


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR007582  TFIID subunit TAF5, NTD2 domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043966 histone H3 acetylation IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0030914 STAGA complex IEA
 cellular_componentGO:0033276 transcription factor TFTC complex IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0004402 histone acetyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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