ENSGALG00000011309


Gallus gallus

Features
Gene ID: ENSGALG00000011309
  
Biological name :PLXNC1
  
Synonyms : plexin C1 / PLXNC1
  
Possible biological names infered from orthology : O60486 / Q9QZC2
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 45063944
Gene end: 45130477
  
Corresponding Affymetrix probe sets: Gga.16573.1.S1_at (Chicken Array)   Gga.18122.1.S1_s_at (Chicken Array)   GgaAffx.7190.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018429
NCBI entrez gene - 417901     See in Manteia.
RefSeq - XM_015284072
swissprot - F1NWC5
Ensembl - ENSGALG00000011309
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 plxnc1ENSDARG00000015278Danio rerio
 O60486ENSG00000136040Homo sapiens
 Plxnc1ENSMUSG00000074785Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PLXND1 / plexin D1 / Q3UH93* / Q9Y4D7*ENSGALG0000000847334
PLXNB1 / plexin B1 / O43157* / Q8CJH3*ENSGALG0000000652629
PLXNA2 / plexin A2 / O75051* / P70207*ENSGALG0000000126428
PLXNA1 / plexin A1 / P70206* / Q9UIW2*ENSGALG0000000609728
PLXNA4 / plexin A4 / Q80UG2* / Q9HCM2*ENSGALG0000000647328
PLXNB2 / plexin B2 / B2RXS4* / O15031*ENSGALG0000003986128


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR002909  IPT domain
 IPR008936  Rho GTPase activation protein
 IPR013548  Plexin, cytoplasmic RasGAP domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR031148  Plexin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007162 negative regulation of cell adhesion IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0008360 regulation of cell shape IBA
 biological_processGO:0043087 regulation of GTPase activity IBA
 biological_processGO:0050772 positive regulation of axonogenesis IBA
 biological_processGO:0071526 semaphorin-plexin signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0017154 semaphorin receptor activity IEA


Pathways (from Reactome)
Pathway description
Other semaphorin interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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