ENSDARG00000015278


Danio rerio

Features
Gene ID: ENSDARG00000015278
  
Biological name :plxnc1
  
Synonyms : plexin C1 / plxnc1
  
Possible biological names infered from orthology : O60486 / Q9QZC2
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 18281954
Gene end: 18315912
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000011546
Ensembl peptide - ENSDARP00000115802
Ensembl peptide - ENSDARP00000156547
swissprot - F1QS13
swissprot - Q5RGW1
ZFIN ID - ZDB-GENE-030131-1620
Ensembl - ENSDARG00000015278
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PLXNC1ENSGALG00000011309Gallus gallus
 O60486ENSG00000136040Homo sapiens
 Plxnc1ENSMUSG00000074785Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
plxnb1b / plexin b1b / O43157* / PLXNB1* / plexin B1*ENSDARG0000001721130
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG0000000381129
plxna3 / plexin A3 / P51805* / P70208*ENSDARG0000000717229
plxna4 / plexin A4 / Q80UG2* / Q9HCM2*ENSDARG0000001932829
plxnb3 / plexin B3 / Q9QY40* / Q9ULL4*ENSDARG0000003299029
plxnb2b / plexin b2b / O15031* / PLXNB2* / plexin B2*ENSDARG0000003698529
plxna2 / plexin A2 / O75051* / P70207*ENSDARG0000006037229
plxna1a / plexin A1a / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000010545229
LO018148.1 / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000011482327
plxnb1a / plexin b1a / PLXNB1* / O43157* / Q8CJH3* / plexin B1*ENSDARG0000007582123
si:ch211-127b11.1 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG000000770903
si:dkey-183c2.4 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG000000798923
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG000000947993
plxnd1 / plexin D1 / Q3UH93* / Q9Y4D7*ENSDARG000000860570


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002909  IPT domain
 IPR008936  Rho GTPase activation protein
 IPR013548  Plexin, cytoplasmic RasGAP domain
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR031148  Plexin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007162 negative regulation of cell adhesion IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0008360 regulation of cell shape IBA
 biological_processGO:0043087 regulation of GTPase activity IDA
 biological_processGO:0050772 positive regulation of axonogenesis IBA
 biological_processGO:0071526 semaphorin-plexin signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0017154 semaphorin receptor activity IEA


Pathways (from Reactome)
Pathway description
Other semaphorin interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000078707 sema7a / semaphorin 7A / O75326* / Q9QUR8* / semaphorin 7A (John Milton Hagen blood group)*  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr