ENSDARG00000079892


Danio rerio
domainsi:dkey-183c2.4plexinmembranesemarepeatwdyvtnrepeat-like-containingsuperfamilypsifamilysemaphorin-plexinsignalingpathwayintegralcomponentsemaphorinreceptoractivity

Features
Gene ID: ENSDARG00000079892
  
Biological name :si:dkey-183c2.4
  
Synonyms : si:dkey-183c2.4
  
Possible biological names infered from orthology : B2RXS4 / O15031 / plexin B2 / PLXNB2
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 14644076
Gene end: 14649158
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113132
NCBI entrez gene - 561237     See in Manteia.
RefSeq - NM_001030156
RefSeq Peptide - NP_001025327
swissprot - Q5RH90
ZFIN ID - ZDB-GENE-041210-121
Ensembl - ENSDARG00000079892
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PLXNB2ENSGALG00000039861Gallus gallus
 O15031ENSG00000196576Homo sapiens
 B2RXS4ENSMUSG00000036606Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG0000000381190
plxnb2a / plexin b2a / O15031* / B2RXS4* / PLXNB2* / plexin B2*ENSDARG0000009479988
si:ch211-127b11.1 / B2RXS4* / O15031* / PLXNB2* / plexin B2*ENSDARG0000007709076
plxnb2b / plexin b2b / O15031* / PLXNB2* / plexin B2*ENSDARG0000003698554
plxnb1b / plexin b1b / O43157* / PLXNB1* / plexin B1*ENSDARG0000001721131
plxnb1a / plexin b1a / PLXNB1* / O43157* / Q8CJH3* / plexin B1*ENSDARG0000007582130
plxnb3 / plexin B3 / Q9QY40* / Q9ULL4*ENSDARG0000003299029
plxna4 / plexin A4 / Q80UG2* / Q9HCM2*ENSDARG0000001932826
plxna2 / plexin A2 / O75051* / P70207*ENSDARG0000006037226
LO018148.1 / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000011482326
plxna3 / plexin A3 / P51805* / P70208*ENSDARG0000000717225
plxna1a / plexin A1a / PLXNA1* / Q9UIW2* / plexin A1*ENSDARG0000010545225
plxnd1 / plexin D1 / Q3UH93* / Q9Y4D7*ENSDARG0000008605714
plxnc1 / plexin C1 / O60486* / Q9QZC2*ENSDARG000000152786


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR031148  Plexin family


Gene Ontology (GO)
cell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcellular response to stimuluscell communicationcell communicationcellular response to stimuluscellular response to stimulus
signaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activity
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0071526 semaphorin-plexin signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0017154 semaphorin receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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