ENSGALG00000011565


Gallus gallus

Features
Gene ID: ENSGALG00000011565
  
Biological name :TDRD9
  
Synonyms : TDRD9 / tudor domain containing 9
  
Possible biological names infered from orthology : ATP-dependent RNA helicase TDRD9 / Q14BI7 / Q8NDG6
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 50651466
Gene end: 50702881
  
Corresponding Affymetrix probe sets: GgaAffx.7325.1.S1_at (Chicken Array)   GgaAffx.7325.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018840
NCBI entrez gene - 423488     See in Manteia.
RefSeq - XM_004936387
RefSeq - XM_015287835
RefSeq - XM_004936388
RefSeq - XM_015287833
swissprot - F1NWS9
Ensembl - ENSGALG00000011565
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tdrd9ENSDARG00000013453Danio rerio
 TDRD9ENSG00000156414Homo sapiens
 Tdrd9ENSMUSG00000054003Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DHX57 / DExH-box helicase 57 / Q6P158* / Q6P5D3* / Putative ATP-dependent RNA helicase DHX57 *ENSGALG0000004155819
DHX29 / DExH-box helicase 29 / Q6PGC1* / Q7Z478* / ATP-dependent RNA helicase DHX29 *ENSGALG0000001470017
DHX36 / DEAH-box helicase 36 / Q8VHK9* / Q9H2U1* / ATP-dependent RNA helicase DHX36 *ENSGALG0000004308217
DHX30 / putative ATP-dependent RNA helicase DHX30 precursor / Q99PU8* / Q7L2E3* / DExH-box helicase 30* / Putative ATP-dependent RNA helicase DHX30 *ENSGALG0000003983015
B2RR83* / Q9H6S0* / YTHDC2* / YTH domain containing 2*ENSGALG000000001899
B2RR83* / Q9H6S0* / YTHDC2* / YTH domain containing 2*ENSGALG000000296817


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR002999  Tudor domain
 IPR007502  Helicase-associated domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IBA
 biological_processGO:0007140 male meiotic nuclear division IEA
 biological_processGO:0007141 male meiosis I IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0009566 fertilization IEA
 biological_processGO:0010529 negative regulation of transposition IEA
 biological_processGO:0034587 piRNA metabolic process IEA
 biological_processGO:0043046 DNA methylation involved in gamete generation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0043186 P granule IBA
 cellular_componentGO:0071547 piP-body IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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