ENSGALG00000011897


Gallus gallus
SMDT1calciumiontransportmitochondrionessentialmcuregulatortransmembraneimporthomeostasisnucleusintegralcomponentinnermembraneuniplexcomplexprocessingsmdt

Features
Gene ID: ENSGALG00000011897
  
Biological name :SMDT1
  
Synonyms : single-pass membrane protein with aspartate rich tail 1 / SMDT1
  
Possible biological names infered from orthology : Q9DB10 / Q9H4I9
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 49454792
Gene end: 49456765
  
Corresponding Affymetrix probe sets: Gga.9946.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019392
Ensembl peptide - ENSGALP00000054776
NCBI entrez gene - 770755     See in Manteia.
RefSeq - XM_001233648
swissprot - A0A1D5PPH6
swissprot - F1NJF9
Ensembl - ENSGALG00000011897
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smdt1aENSDARG00000095826Danio rerio
 smdt1bENSDARG00000098852Danio rerio
 SMDT1ENSG00000183172Homo sapiens
 Smdt1ENSMUSG00000022452Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018782  Essential MCU regulator, mitochondrial


Gene Ontology (GO)
establishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationregulation of biological qualityestablishment of localizationestablishment of localizationregulation of biological qualityregulation of biological quality
cellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellorganellemembraneprotein-containing complexcellcellorganelleorganellemembranemembraneprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006851 mitochondrial calcium ion transmembrane transport IEA
 biological_processGO:0036444 calcium import into the mitochondrion IEA
 biological_processGO:0051560 mitochondrial calcium ion homeostasis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0031305 integral component of mitochondrial inner membrane IEA
 cellular_componentGO:1990246 uniplex complex IEA


Pathways (from Reactome)
Pathway description
Mitochondrial calcium ion transport
Processing of SMDT1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000008280 PMPCB / peptidase, mitochondrial processing beta subunit / O75439* / Q9CXT8* / peptidase (mitochondrial processing) beta*  / reaction
 ENSGALG00000013853 AFG3L2 / AFG3 like matrix AAA peptidase subunit 2 / Q8JZQ2* / Q9Y4W6* / AFG3-like protein 2 *  / complex / reaction
 ENSGALG00000014567 PHB2 / prohibitin-2 / O35129* / Q99623*  / complex / reaction
 ENSGALG00000038604 PHB / P84173 / Prohibitin / P35232* / P67778*  / complex / reaction






 

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