ENSGALG00000011958


Gallus gallus

Features
Gene ID: ENSGALG00000011958
  
Biological name :TEF
  
Synonyms : Q92172 / TEF / Transcription factor VBP
  
Possible biological names infered from orthology : Q10587 / Q9JLC6 / TEF, PAR bZIP transcription factor / Thyrotroph embryonic factor
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 49698484
Gene end: 49713034
  
Corresponding Affymetrix probe sets: Gga.15507.1.S1_at (Chicken Array)   Gga.5288.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048592
Ensembl peptide - ENSGALP00000037167
NCBI entrez gene - 396342     See in Manteia.
RefSeq - NM_205382
RefSeq Peptide - NP_990713
swissprot - Q92172
swissprot - A0A1D5P7A5
Ensembl - ENSGALG00000011958
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tefaENSDARG00000039117Danio rerio
 tefbENSDARG00000098103Danio rerio
 TEFENSG00000167074Homo sapiens
 TefENSMUSG00000022389Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HLF / HLF, PAR bZIP transcription factor / Q16534* / Q8BW74* / Hepatic leukemia factor *ENSGALG0000000305948


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain
 IPR029832  Thyrotroph embryonic factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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