ENSGALG00000012339


Gallus gallus

Features
Gene ID: ENSGALG00000012339
  
Biological name :ATL1
  
Synonyms : ATL1 / atlastin GTPase 1
  
Possible biological names infered from orthology : Atlastin-1 / Q8BH66 / Q8WXF7
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 57999534
Gene end: 58025515
  
Corresponding Affymetrix probe sets: Gga.15327.1.S1_at (Chicken Array)   Gga.5747.2.A1_at (Chicken Array)   Gga.6199.1.S1_at (Chicken Array)   Gga.6199.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020135
Ensembl peptide - ENSGALP00000060356
Ensembl peptide - ENSGALP00000052181
NCBI entrez gene - 423577     See in Manteia.
RefSeq - XM_015276747
RefSeq - XM_015276748
swissprot - A0A1L1RNI5
swissprot - A0A1D5PHA4
swissprot - F1NAM6
Ensembl - ENSGALG00000012339
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atl1ENSDARG00000060481Danio rerio
 ATL1ENSG00000198513Homo sapiens
 Atl1ENSMUSG00000021066Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATL2 / atlastin GTPase 2 / Q6PA06* / Q8NHH9* / Mus musculus atlastin GTPase 2 (Atl2), transcript variant 5, mRNA.*ENSGALG0000003728964


Protein motifs (from Interpro)
Interpro ID Name
 IPR003191  Guanylate-binding protein/Atlastin, C-terminal
 IPR015894  Guanylate-binding protein, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030386  GB1/RHD3-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007029 endoplasmic reticulum organization IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:1990809 endoplasmic reticulum tubular network membrane organization IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0071782 endoplasmic reticulum tubular network IEA
 cellular_componentGO:0098826 endoplasmic reticulum tubular network membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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