ENSGALG00000012631


Gallus gallus
wdPWP1repeatregulationdomainhistonehyvtnrepeat-like-containingsuperfamily-repeat-containingconservedsiteg-proteinbetawd-peptidyl-serinephosphorylationstatprotein-ktrimethylationtranscriptionnucleolarlargerrnarnapolymerasestemcelldifferentiation

Features
Gene ID: ENSGALG00000012631
  
Biological name :PWP1
  
Synonyms : PWP1 / PWP1 homolog, endonuclein
  
Possible biological names infered from orthology : Periodic tryptophan / Q13610 / Q99LL5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 53393745
Gene end: 53408107
  
Corresponding Affymetrix probe sets: GgaAffx.13042.1.S1_s_at (Chicken Array)   GgaAffx.8012.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020588
NCBI entrez gene - 418066     See in Manteia.
RefSeq - NM_001030761
RefSeq Peptide - NP_001025932
swissprot - F1NYF5
Ensembl - ENSGALG00000012631
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pwp1ENSDARG00000015921Danio rerio
 PWP1ENSG00000136045Homo sapiens
 Pwp1ENSMUSG00000001785Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
nitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen compound metabolic processcell communicationcellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimuluscellular component organizationmethylationbiosynthetic processcellular developmental processnitrogen componitrogen compound metabolic processcell communicacell communicationcellular metabcellular metabolic processprimary metaboprimary metabolic processorganic substaorganic substance metabolic processcellular respocellular response to stimuluscellular compocellular component organizationmethylationmethylationbiosynthetic pbiosynthetic processcellular develcellular developmental process
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 biological_processGO:0033140 negative regulation of peptidyl-serine phosphorylation of STAT protein IEA
 biological_processGO:0034773 histone H4-K20 trimethylation IEA
 biological_processGO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I IEA
 biological_processGO:2000738 positive regulation of stem cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 molecular_functionGO:1990889 H4K20me3 modified histone binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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