ENSGALG00000012768


Gallus gallus

Features
Gene ID: ENSGALG00000012768
  
Biological name :GCM2
  
Synonyms : chorion-specific transcription factor GCMb / GCM2
  
Possible biological names infered from orthology : glial cells missing homolog 2 / O75603
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 63420678
Gene end: 63425726
  
Corresponding Affymetrix probe sets: GgaAffx.8099.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020805
NCBI entrez gene - 428478     See in Manteia.
RefSeq - NM_001008480
RefSeq Peptide - NP_001008480
swissprot - F1P4X8
Ensembl - ENSGALG00000012768
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gcm2ENSDARG00000045413Danio rerio
 GCM2ENSG00000124827Homo sapiens
 Gcm2ENSMUSG00000021362Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GCM1 / chorion-specific transcription factor GCMa / P70348* / Q9NP62* / glial cells missing homolog 1*ENSGALG0000001631629


Protein motifs (from Interpro)
Interpro ID Name
 IPR003902  Transcription regulator GCM domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0030643 cellular phosphate ion homeostasis IEA
 biological_processGO:0042063 gliogenesis IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060017 parathyroid gland development IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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