ENSGALG00000013647


Gallus gallus

Features
Gene ID: ENSGALG00000013647
  
Biological name :TFB1M
  
Synonyms : TFB1M / transcription factor B1, mitochondrial
  
Possible biological names infered from orthology : Dimethyladenosine transferase 1, mitochondrial / Q8JZM0 / Q8WVM0
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 50738394
Gene end: 50765171
  
Corresponding Affymetrix probe sets: Gga.12370.1.S1_at (Chicken Array)   Gga.12370.2.S1_at (Chicken Array)   Gga.12370.3.S1_at (Chicken Array)   Gga.12370.3.S1_a_at (Chicken Array)   Gga.12370.3.S1_x_at (Chicken Array)   GgaAffx.24240.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022157
Ensembl peptide - ENSGALP00000061111
Ensembl peptide - ENSGALP00000052259
NCBI entrez gene - 428608     See in Manteia.
RefSeq - XM_004935644
RefSeq - XM_004935645
RefSeq - XM_015284249
RefSeq - XM_426165
swissprot - A0A1L1RQN9
swissprot - A0A1D5PHI0
swissprot - E1BWX0
Ensembl - ENSGALG00000013647
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfb1mENSDARG00000040727Danio rerio
 TFB1MENSG00000029639Homo sapiens
 Tfb1mENSMUSG00000036983Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DIMT1 / DIM1 dimethyladenosine transferase 1 homolog / Q9D0D4* / Q9UNQ2* / Probable dimethyladenosine transferase *ENSGALG0000002056920


Protein motifs (from Interpro)
Interpro ID Name
 IPR001737  Ribosomal RNA adenine methyltransferase KsgA/Erm
 IPR011530  Ribosomal RNA adenine dimethylase
 IPR020598  Ribosomal RNA adenine methylase transferase, N-terminal
 IPR023165  rRNA adenine dimethylase-like
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0031167 rRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0042645 mitochondrial nucleoid IEA
 molecular_functionGO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008649 rRNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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