ENSGALG00000014138


Gallus gallus
transcriptionrnaiiNFXL1zincbindingfingerregulationmembranesequence-specificdnaactivitynf-x-typephd-typeconservedsitedna-templatednucleusintegralcomponentregulatoryregiontranscriptionalrepressorproximalpromoterdna-bindingfactorion

Features
Gene ID: ENSGALG00000014138
  
Biological name :NFXL1
  
Synonyms : NFXL1 / nuclear transcription factor, X-box binding like 1
  
Possible biological names infered from orthology : Q6ZNB6
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 67016664
Gene end: 67057623
  
Corresponding Affymetrix probe sets: GgaAffx.8968.1.S1_at (Chicken Array)   GgaAffx.8968.2.S1_at (Chicken Array)   GgaAffx.8968.2.S1_s_at (Chicken Array)   GgaAffx.8968.3.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022832
NCBI entrez gene - 100859761     See in Manteia.
RefSeq - XM_003641238
RefSeq - XM_004936055
swissprot - E1C027
Ensembl - ENSGALG00000014138
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nfxl1ENSDARG00000070127Danio rerio
 NFXL1ENSG00000170448Homo sapiens
 Nfxl1ENSMUSG00000072889Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NFX1 / nuclear transcription factor, X-box binding 1 / B1AY10* / Q12986* / Transcriptional repressor NF-X1 *ENSGALG0000004372424


Protein motifs (from Interpro)
Interpro ID Name
 IPR000967  Zinc finger, NF-X1-type
 IPR019786  Zinc finger, PHD-type, conserved site


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic nitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic process
organic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityion bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor acDNA-binding transcription factor activityion bindingion binding
cellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellcellorganelleorganellemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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