ENSGALG00000043724


Gallus gallus

Features
Gene ID: ENSGALG00000043724
  
Biological name :NFX1
  
Synonyms : NFX1 / nuclear transcription factor, X-box binding 1
  
Possible biological names infered from orthology : B1AY10 / Q12986 / Transcriptional repressor NF-X1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 55550682
Gene end: 55599682
  
Corresponding Affymetrix probe sets: GgaAffx.23929.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048993
NCBI entrez gene - 420796     See in Manteia.
RefSeq - XM_004935068
RefSeq - XM_015275917
RefSeq - XM_015275918
swissprot - A0A1D5P8E6
Ensembl - ENSGALG00000043724
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-10f23.2ENSDARG00000105669Danio rerio
 NFX1ENSG00000086102Homo sapiens
 Nfx1ENSMUSG00000028423Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NFXL1 / nuclear transcription factor, X-box binding like 1 / Q6ZNB6*ENSGALG0000001413828


Protein motifs (from Interpro)
Interpro ID Name
 IPR000967  Zinc finger, NF-X1-type
 IPR001374  R3H domain
 IPR001841  Zinc finger, RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045347 negative regulation of MHC class II biosynthetic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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