ENSGALG00000014915


Gallus gallus

Features
Gene ID: ENSGALG00000014915
  
Biological name :THOC1
  
Synonyms : Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. / THOC1
  
Possible biological names infered from orthology : Q8R3N6 / Q96FV9 / THO complex 1 / THO complex subunit 1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 102424358
Gene end: 102444661
  
Corresponding Affymetrix probe sets: Gga.1237.1.S1_at (Chicken Array)   Gga.4741.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024009
Ensembl peptide - ENSGALP00000060209
Ensembl peptide - ENSGALP00000059949
Ensembl peptide - ENSGALP00000057143
NCBI entrez gene - 421062     See in Manteia.
RefSeq - XM_015277965
RefSeq - NM_001321609
RefSeq - NM_001321610
RefSeq Peptide - NP_001308539
RefSeq Peptide - NP_001308538
swissprot - F1NMW7
swissprot - A0A1L1RN55
swissprot - A0A1L1RME0
swissprot - A0A1D5PW14
Ensembl - ENSGALG00000014915
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thoc1ENSDARG00000088246Danio rerio
 THOC1ENSG00000079134Homo sapiens
 Thoc1ENSMUSG00000024287Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000488  Death domain
 IPR011029  Death-like domain superfamily
 IPR021861  THO complex, subunit THOC1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000018 regulation of DNA recombination IEA
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0031297 replication fork processing IEA
 biological_processGO:0032784 regulation of DNA-templated transcription, elongation IEA
 biological_processGO:0032786 positive regulation of DNA-templated transcription, elongation IEA
 biological_processGO:0046784 viral mRNA export from host cell nucleus IEA
 biological_processGO:0048297 negative regulation of isotype switching to IgA isotypes IEA
 biological_processGO:2000002 negative regulation of DNA damage checkpoint IEA
 cellular_componentGO:0000346 transcription export complex IEA
 cellular_componentGO:0000347 THO complex IEA
 cellular_componentGO:0000445 THO complex part of transcription export complex IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0045171 intercellular bridge IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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