ENSGALG00000015627


Gallus gallus

Features
Gene ID: ENSGALG00000015627
  
Biological name :HAPLN1
  
Synonyms : HAPLN1 / Hyaluronan and proteoglycan link protein 1 / P07354
  
Possible biological names infered from orthology : P10915 / Q9QUP5
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 62521046
Gene end: 62613868
  
Corresponding Affymetrix probe sets: Gga.19388.1.S1_at (Chicken Array)   Gga.3928.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025150
Ensembl peptide - ENSGALP00000062830
NCBI entrez gene - 396475     See in Manteia.
RefSeq - XM_015280598
RefSeq - NM_205482
RefSeq - XM_015280596
RefSeq - XM_015280597
RefSeq - XM_015280594
RefSeq Peptide - NP_990813
swissprot - P07354
Ensembl - ENSGALG00000015627
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hapln1bENSDARG00000068516Danio rerio
 HAPLN1ENSG00000145681Homo sapiens
 Hapln1ENSMUSG00000021613Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HAPLN4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSGALG0000002656353
HAPLN3 / hyaluronan and proteoglycan link protein 3 / Q80WM5* / Q96S86*ENSGALG0000002113548
HAPLN2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSGALG0000001323445
BCAN / brevican / Q61361* / Q96GW7* / Brevican core protein *ENSGALG0000004546936
ACAN / Q61282* / aggrecan* / Aggrecan core protein *ENSGALG0000000672535
VCAN / versican core protein precursor / P13611* / versican*ENSGALG0000001562434
NCAN / neurocan core protein precursor / O14594* / neurocan*ENSGALG0000003648434
STAB1 / stabilin 1 / Q9NY15*ENSGALG0000004367215
TNFAIP6 / TNF alpha induced protein 6 / O08859* / P98066* / tumor necrosis factor alpha induced protein 6*ENSGALG0000001248113
ENSGALG000000298246
ENSGALG000000392450
ENSGALG000000413600


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IBA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007417 central nervous system development IBA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0005201 extracellular matrix structural constituent IBA
 molecular_functionGO:0005540 hyaluronic acid binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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