ENSGALG00000043672


Gallus gallus

Features
Gene ID: ENSGALG00000043672
  
Biological name :STAB1
  
Synonyms : STAB1 / stabilin 1
  
Possible biological names infered from orthology : Q9NY15
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 640217
Gene end: 687795
  
Corresponding Affymetrix probe sets: GgaAffx.1002.1.S1_s_at (Chicken Array)   GgaAffx.24426.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045058
Ensembl peptide - ENSGALP00000049400
Ensembl peptide - ENSGALP00000047732
Ensembl peptide - ENSGALP00000047027
NCBI entrez gene - 415894     See in Manteia.
RefSeq - XM_015292747
RefSeq - XM_015292748
swissprot - A0A1D5P9J6
swissprot - A0A1D5P4W8
swissprot - A0A1D5P2X6
swissprot - A0A1D5NXG2
Ensembl - ENSGALG00000043672
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stab1ENSDARG00000076484Danio rerio
 STAB1ENSG00000010327Homo sapiens
 Stab1ENSMUSG00000042286Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG000000392459
ACAN / Q61282* / aggrecan* / Aggrecan core protein *ENSGALG000000067258
VCAN / versican core protein precursor / P13611* / versican*ENSGALG000000156247
ENSGALG000000298245
NCAN / neurocan core protein precursor / O14594* / neurocan*ENSGALG000000364845
ENSGALG000000413605
BCAN / brevican / Q61361* / Q96GW7* / Brevican core protein *ENSGALG000000454695
HAPLN2 / hyaluronan and proteoglycan link protein 2 / Q9ESM3* / Q9GZV7*ENSGALG000000132342
HAPLN1 / P07354 / Hyaluronan and proteoglycan link protein 1 / P10915* / Q9QUP5*ENSGALG000000156272
HAPLN3 / hyaluronan and proteoglycan link protein 3 / Q80WM5* / Q96S86*ENSGALG000000211352
HAPLN4 / hyaluronan and proteoglycan link protein 4 / Q80WM4* / Q86UW8*ENSGALG000000265632
TNFAIP6 / TNF alpha induced protein 6 / O08859* / P98066* / tumor necrosis factor alpha induced protein 6*ENSGALG000000124811


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR000742  EGF-like domain
 IPR000782  FAS1 domain
 IPR001881  EGF-like calcium-binding domain
 IPR002049  Laminin EGF domain
 IPR003645  Follistatin-like, N-terminal
 IPR013032  EGF-like, conserved site
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR024731  EGF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007267 cell-cell signaling IEA
 biological_processGO:0016525 negative regulation of angiogenesis IEA
 biological_processGO:0042742 defense response to bacterium IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005041 low-density lipoprotein particle receptor activity IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA
 molecular_functionGO:0030169 low-density lipoprotein particle binding IEA


Pathways (from Reactome)
Pathway description
Scavenging by Class H Receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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