ENSGALG00000016276


Gallus gallus

Features
Gene ID: ENSGALG00000016276
  
Biological name :KHDRBS2
  
Synonyms : KHDRBS2 / KH RNA binding domain containing, signal transduction associated 2
  
Possible biological names infered from orthology : KH domain-containing, RNA-binding, signal transduction-associated protein 2 / Q5VWX1 / Q9WU01
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 86406473
Gene end: 86714063
  
Corresponding Affymetrix probe sets: Gga.14902.1.S1_at (Chicken Array)   GgaAffx.10404.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026192
NCBI entrez gene - 428643     See in Manteia.
RefSeq - XM_426201
swissprot - E1BVW8
Ensembl - ENSGALG00000016276
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q08BJ2ENSDARG00000069469Danio rerio
 Q5VWX1ENSG00000112232Homo sapiens
 Q9WU01ENSMUSG00000026058Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KHDRBS1 / KH domain-containing, RNA-binding, signal transduction-associated protein 1 / Q07666* / Q60749* / KH RNA binding domain containing, signal transduction associated 1*ENSGALG0000000327264
KHDRBS3 / KH RNA binding domain containing, signal transduction associated 3 / O75525* / Q9R226* / KH domain-containing, RNA-binding, signal transduction-associated protein 3 *ENSGALG0000003151964
QKI / Q9YH18 / Protein quaking / Qk* / Q9QYS9* / Q96PU8* / QKI, KH domain containing RNA binding*ENSGALG0000001155529


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR032335  Sam68, tyrosine-rich domain
 IPR032571  KHDRBS, Qua1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048024 regulation of mRNA splicing, via spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008143 poly(A) binding IEA
 molecular_functionGO:0008266 poly(U) RNA binding IEA
 molecular_functionGO:0017124 SH3 domain binding IEA
 molecular_functionGO:0042169 SH2 domain binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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