ENSGALG00000016294


Gallus gallus

Features
Gene ID: ENSGALG00000016294
  
Biological name :HMGCLL1
  
Synonyms : 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 / HMGCLL1
  
Possible biological names infered from orthology : 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic / Q8JZS7 / Q8TB92
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 87806026
Gene end: 87878825
  
Corresponding Affymetrix probe sets: Gga.10461.1.S1_at (Chicken Array)   Gga.10461.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026228
Ensembl peptide - ENSGALP00000050625
NCBI entrez gene - 421886     See in Manteia.
RefSeq - XM_015284899
RefSeq - XM_015284900
RefSeq - XM_015284901
swissprot - E1BU09
swissprot - A0A1D5PCY4
Ensembl - ENSGALG00000016294
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A8WG57ENSDARG00000088740Danio rerio
 Q8TB92ENSG00000146151Homo sapiens
 Q8JZS7ENSMUSG00000007908Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HMGCL / hydroxymethylglutaryl-CoA lyase, mitochondrial isoform 4 / P38060* / P35914* / 3-hydroxymethyl-3-methylglutaryl-CoA lyase* / Hydroxymethylglutaryl-CoA lyase, mitochondrial *ENSGALG0000000405765


Protein motifs (from Interpro)
Interpro ID Name
 IPR000138  Hydroxymethylglutaryl-CoA lyase, active site
 IPR000891  Pyruvate carboxyltransferase
 IPR013785  Aldolase-type TIM barrel
 IPR030021  HMG-CoA lyase-like1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046951 ketone body biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004419 hydroxymethylglutaryl-CoA lyase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of Ketone Bodies


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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