ENSGALG00000016478


Gallus gallus

Features
Gene ID: ENSGALG00000016478
  
Biological name :MATN3
  
Synonyms : MATN3 / Matrilin-3 / O42401
  
Possible biological names infered from orthology : O15232 / O35701
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 101853568
Gene end: 101868845
  
Corresponding Affymetrix probe sets: Gga.3587.1.S1_at (Chicken Array)   Gga.3587.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000036079
NCBI entrez gene - 395954     See in Manteia.
RefSeq - NM_205072
RefSeq Peptide - NP_990403
swissprot - O42401
Ensembl - ENSGALG00000016478
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 matn3aENSDARG00000069245Danio rerio
 matn3bENSDARG00000069265Danio rerio
 MATN3ENSG00000132031Homo sapiens
 Matn3ENSMUSG00000020583Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MATN4* / Q8VCP9* / O95460* / Q86T13* / CLEC14A* / matrilin 4* / C-type lectin domain containing 14A* / C-type lectin domain family 14 member A *ENSGALG0000000402840
MATN2 / matrilin 2 / O00339* / O08746* / Mus musculus matrilin 2 (Matn2), transcript variant 1, mRNA.*ENSGALG0000004467538
MATN1 / matrilin 1, cartilage matrix protein / P21941* / P51942* / Cartilage matrix protein *ENSGALG0000004318535
SCUBE3 / signal peptide, CUB domain and EGF like domain containing 3 / Q66PY1* / Q8IX30* / Signal peptide, CUB and EGF-like domain-containing protein 3 *ENSGALG0000000267515
CD93 / CD93 molecule / O89103* / Q9NPY3* / Complement component C1q receptor *ENSGALG0000000835915
SCUBE1 / signal peptide, CUB domain and EGF like domain containing 1 / Q6NZL8* / Q8IWY4* / signal peptide, CUB domain, EGF-like 1*ENSGALG0000001417815
VWA1 / von Willebrand factor A domain containing 1 / Q6PCB0* / Q8R2Z5*ENSGALG0000000152714
SCUBE2 / signal peptide, CUB domain and EGF like domain containing 2 / Q9JJS0* / Q9NQ36* / Signal peptide, CUB and EGF-like domain-containing protein 2 *ENSGALG0000003216114
THBD / thrombomodulin / P07204* / P15306*ENSGALG0000004444214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002035  von Willebrand factor, type A
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR019466  Matrilin, coiled-coil trimerisation domain
 IPR030765  Matrilin 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
ECM proteoglycans
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003283 COMP / cartilage oligomeric matrix protein / P49747* / Q9R0G6*  / complex / reaction






 

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