ENSGALG00000016523


Gallus gallus

Features
Gene ID: ENSGALG00000016523
  
Biological name :RS1
  
Synonyms : retinoschisin 1 / RS1
  
Possible biological names infered from orthology : O15537 / Q9Z1L4 / retinoschisis (X-linked, juvenile) 1 (human)
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 120497468
Gene end: 120509403
  
Corresponding Affymetrix probe sets: GgaAffx.10573.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026614
NCBI entrez gene - 772315     See in Manteia.
RefSeq - NM_001134975
RefSeq Peptide - NP_001128447
swissprot - F1NI48
Ensembl - ENSGALG00000016523
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rs1aENSDARG00000027236Danio rerio
 RS1ENSG00000102104Homo sapiens
 Rs1ENSMUSG00000031293Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F5 / coagulation factor V / O88783* / P12259* / Coagulation factor V Coagulation factor V heavy chain Coagulation factor V light chain*ENSGALG0000002929833
F8 / coagulation factor VIII / P00451* / Q06194*ENSGALG0000000507730
MFGE8 / lactadherin isoform 2 precursor / P21956* / Q08431* / milk fat globule-EGF factor 8 protein*ENSGALG0000000670229
EDIL3 / EGF like repeats and discoidin domains 3 / O35474* / O43854* / EGF-like repeat and discoidin I-like domain-containing protein 3 *ENSGALG0000001563028
NRP2 / neuropilin-2 precursor / O35375* / O60462* / neuropilin 2*ENSGALG0000000862123
NRP1 / neuropilin-1 precursor / O14786* / P97333* / neuropilin 1*ENSGALG0000000714022
DCBLD2 / discoidin, CUB and LCCL domain-containing protein 2 precursor / Q91ZV3* / Q96PD2* / discoidin, CUB and LCCL domain containing 2* / Mus musculus discoidin, CUB and LCCL domain cont...ENSGALG0000001525815
HEPH / hephaestin / Q9BQS7* / Q9Z0Z4*ENSGALG0000003741015
DCBLD1 / discoidin, CUB and LCCL domain containing 1 / Q8N8Z6* / Q9D4J3* / Mus musculus discoidin, CUB and LCCL domain containing 1 (Dcbld1), transcript variant 2, mRNA.*ENSGALG0000001490713
ENSGALG0000003077311
HEPHL1 / hephaestin like 1 / Q3V1H3* / Q6MZM0* / Hephaestin-like protein 1 *ENSGALG0000004302711
ENSGALG0000002906610


Protein motifs (from Interpro)
Interpro ID Name
 IPR000421  Coagulation factor 5/8 C-terminal domain
 IPR008979  Galactose-binding-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0010842 retina layer formation IEA
 biological_processGO:0016062 adaptation of rhodopsin mediated signaling IEA
 biological_processGO:0051260 protein homooligomerization IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0019897 extrinsic component of plasma membrane IEA
 molecular_functionGO:0001786 phosphatidylserine binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA
 molecular_functionGO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEA
 molecular_functionGO:0010314 phosphatidylinositol-5-phosphate binding IEA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding IEA
 molecular_functionGO:0043325 phosphatidylinositol-3,4-bisphosphate binding IEA
 molecular_functionGO:0070273 phosphatidylinositol-4-phosphate binding IEA
 molecular_functionGO:0070492 oligosaccharide binding IBA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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