ENSGALG00000016551


Gallus gallus

Features
Gene ID: ENSGALG00000016551
  
Biological name :AP1S2
  
Synonyms : AP-1 complex subunit sigma-2 / AP1S2
  
Possible biological names infered from orthology : adaptor related protein complex 1 sigma 2 subunit / P56377 / Q9DB50
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 121850197
Gene end: 121884181
  
Corresponding Affymetrix probe sets: Gga.2564.1.S1_at (Chicken Array)   Gga.2564.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026659
Ensembl peptide - ENSGALP00000063116
Ensembl peptide - ENSGALP00000050174
Ensembl peptide - ENSGALP00000049976
NCBI entrez gene - 418621     See in Manteia.
RefSeq - XM_015273190
RefSeq - NM_001006261
RefSeq - XM_015273167
RefSeq - XM_015273183
RefSeq Peptide - NP_001006261
swissprot - A0A1L1RWA5
swissprot - A0A1D5PBP4
swissprot - A0A1D5PB56
swissprot - F1NHS7
Ensembl - ENSGALG00000016551
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ap1s2ENSDARG00000058504Danio rerio
 AP1S2ENSG00000182287Homo sapiens
 Ap1s2ENSMUSG00000031367Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AP1S3 / adaptor related protein complex 1 sigma 3 subunit / Q7TN05* / Q96PC3* / AP-1 complex subunit sigma-3 *ENSGALG0000000517169
AP4S1 / adaptor related protein complex 4 sigma 1 subunit / Q9WVL1* / Q9Y587* / AP-4 complex subunit sigma-1 *ENSGALG0000000993624


Protein motifs (from Interpro)
Interpro ID Name
 IPR000804  Clathrin adaptor complex, small chain
 IPR011012  Longin-like domain superfamily
 IPR016635  Adaptor protein complex, sigma subunit
 IPR022775  AP complex, mu/sigma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030117 membrane coat IEA
 molecular_functionGO:0008565 protein transporter activity IEA


Pathways (from Reactome)
Pathway description
MHC class II antigen presentation
Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000004594 CD74 / CD74 molecule / P04233* / P04441* / CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)*  / complex
 ENSGALG00000005139 CLTC / clathrin heavy chain / Q00610*  / complex
 ENSGALG00000015326 CLTA / clathrin light chain A / P09496*  / complex
 ENSGALG00000042213 AP1B1 / adaptor related protein complex 1 beta 1 subunit / O35643* / Q10567* / Mus musculus adaptor protein complex AP-1, beta 1 subunit (Ap1b1), transcript variant 4, mRNA.*  / complex
 ENSGALG00000014853 CLVS2 / clavesin 2 / Q5SYC1* / Q8BG92*  / complex






 

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