ENSGALG00000016664


Gallus gallus

Features
Gene ID: ENSGALG00000016664
  
Biological name :NEIL2
  
Synonyms : endonuclease 8-like 2 / NEIL2
  
Possible biological names infered from orthology : nei like DNA glycosylase 2 / Q6R2P8 / Q969S2
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 107812743
Gene end: 107816159
  
Corresponding Affymetrix probe sets: Gga.10890.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026842
NCBI entrez gene - 422037     See in Manteia.
RefSeq - NM_001277833
RefSeq - XM_015285131
RefSeq Peptide - NP_001264762
swissprot - E1BYL0
Ensembl - ENSGALG00000016664
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 neil3ENSDARG00000020079Danio rerio
 NEIL2ENSG00000154328Homo sapiens
 Neil2ENSMUSG00000035121Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000001071919


Protein motifs (from Interpro)
Interpro ID Name
 IPR010979  Ribosomal protein S13-like, H2TH
 IPR012319  Formamidopyrimidine-DNA glycosylase, catalytic domain
 IPR015886  DNA glycosylase/AP lyase, H2TH DNA-binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006284 base-excision repair IEA
 biological_processGO:0006289 nucleotide-excision repair IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005876 spindle microtubule IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003684 damaged DNA binding IEA
 molecular_functionGO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA


Pathways (from Reactome)
Pathway description
Cleavage of the damaged pyrimidine
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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