ENSMUSG00000035121


Mus musculus
activityNeil2dnabindingglycosylaseaprepairmicrotubuledna-apurinicapyrimidinicsiteendonucleasehydrolasezinchcatalyticlyasedamagedionclassfingerlyase-typeribosomalproteins-likeformamidopyrimidine-dnadomaindna-bindingmutm-like

Features
Gene ID: ENSMUSG00000035121
  
Biological name :Neil2
  
Synonyms : Endonuclease 8-like 2 / Neil2 / Q6R2P8
  
Possible biological names infered from orthology : nei like DNA glycosylase 2 / Q969S2
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: D1
Gene start: 63182443
Gene end: 63193856
  
Corresponding Affymetrix probe sets: 10420736 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000045200
Ensembl peptide - ENSMUSP00000152963
Ensembl peptide - ENSMUSP00000153441
Ensembl peptide - ENSMUSP00000153633
NCBI entrez gene - 382913     See in Manteia.
MGI - MGI:2686058
RefSeq - XM_006519202
RefSeq - NM_201610
RefSeq - XM_006519199
RefSeq Peptide - NP_963904
swissprot - Q1LZM6
swissprot - Q1RLK4
swissprot - Q6R2P8
swissprot - A0A286YDY3
Ensembl - ENSMUSG00000035121
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 neil3ENSDARG00000020079Danio rerio
 NEIL2ENSGALG00000016664Gallus gallus
 NEIL2ENSG00000154328Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Neil3 / Q8K203 / Endonuclease 8-like 3 / Q8TAT5* / nei like DNA glycosylase 3*ENSMUSG0000003939621


Protein motifs (from Interpro)
Interpro ID Name
 IPR000214  Zinc finger, DNA glycosylase/AP lyase-type
 IPR010979  Ribosomal protein S13-like, H2TH
 IPR012319  Formamidopyrimidine-DNA glycosylase, catalytic domain
 IPR015886  DNA glycosylase/AP lyase, H2TH DNA-binding
 IPR035937  MutM-like, N-terminal


Gene Ontology (GO)
nitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabnitrogen compound metabolic processresponse to stressresponse to stresscellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processorganic substance metaborganic substance metabolic processcellular response to stcellular response to stimulus
organic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compound bindingheterocyclic compound bindingcatalytic activity, acting on DNAprotein bindingion bindinghydrolase activitylyase activityorganic cyclic compoorganic cyclic compound bindingheterocyclic compounheterocyclic compound bindingcatalytic activity, catalytic activity, acting on DNAprotein bindingprotein bindingion bindingion bindinghydrolase activityhydrolase activitylyase activitylyase activity
cellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellorganellemembrane-enclosed lumensupramolecular complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumensupramolecular complexsupramolecular complex
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006284 base-excision repair IEA
 biological_processGO:0006289 nucleotide-excision repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005876 spindle microtubule IDA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003684 damaged DNA binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
 molecular_functionGO:0008017 microtubule binding IDA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA
 molecular_functionGO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0140078 class I DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
 molecular_functionGO:0140080 class III/IV DNA-(apurinic or apyrimidinic site) endonuclease activity IEA


Pathways (from Reactome)
Pathway description
Cleavage of the damaged pyrimidine
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway


Phenotype (from MGI, Zfin or HPO)
immune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypehematopoietic system phenotyperespiratory system phenotypecellular phenotypeimmune system phenotypeimmune system phenotypehematopoietic system phenotypehematopoietic system phenotyperespiratory system phenotyperespiratory system phenotypecellular phenotypecellular phenotype
IDPhenotypeDefinition Genetic BG
 MP:0000219 increased neutrophil count "greater than normal neutrophil numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0001861 lung inflammation "local accumulation of fluid, plasma proteins, and leukocytes in the lung" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0003155 abnormal telomere length "abnormal length of the terminal section of a chromosome which has a specialized structure and which is involved in chromosomal replication and stability; normal length is a few hundred base pairs" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, hdene:Howard Dene , Mouse Genome Informatics Curator]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0003674 oxidative stress "condition characterized by an accumulation of free radical groups in the body, which creates a potentially unstable and damaging cellular environment linked to tissue damage, accelerated aging, and degenerative disease; can result from many factors, including exposure to alcohol, medications, poor nutrition, trauma, cold or toxins; may be indicated by low antioxidant levels measured in blood plasma" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0004029 spontaneous chromosome breakage "chromosome breakage due to inherent instability of chromosomes" [llw2:Linda Washburn , Mouse Genome Informatics Curator]
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Allelic Composition: Ednrbtm1.1Nrd/Ednrb+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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